RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 IRX3P78415 501 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 SETQ01105 290 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 PABPC4Q13310 644 aaKnown RBP eCLIP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 SNAPC2Q13487 334 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 RRAGBQ5VZM2 374 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 TRIML1Q8N9V2 468 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 RASSF8Q8NHQ8 419 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 ANP32BQ92688 251 aaKnown RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 RNF25Q96BH1 459 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 CALML4Q96GE6 196 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 PAGE5Q96GU1 130 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 NAT10Q9H0A0 1025 aaKnown RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 ZNF408Q9H9D4 720 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 GBA2Q9HCG7 927 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-224ENST00000552812 RIPK3Q9Y572 518 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 PCDHA5Q9Y5H7 936 aa12.7□□□□□ -0.38
CACNB3-224ENST00000552812 FOXN1O15353 648 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 SMC2O95347 1197 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 STAT3P40763 770 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 NLRP12P59046 1061 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNB3-224ENST00000552812 CEP55Q53EZ4 464 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 SMARCE1Q969G3 411 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 MMTAG2Q9BU76 263 aaKnown RBP12.69□□□□□ -0.38
CACNB3-224ENST00000552812 DNAJC25Q9H1X3 360 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 COL20A1Q9P218 1284 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
CACNB3-224ENST00000552812 MOGSQ13724 837 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 NAALADL2Q58DX5 795 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 PCNX4Q63HM2 1172 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 NIPA1Q7RTP0 329 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 C2orf69Q8N8R5 385 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 GSDMAQ96QA5 445 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 ASCC2Q9H1I8 757 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-224ENST00000552812 NMRK2Q9NPI5 230 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 STK17AQ9UEE5 414 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 MEIS1O00470 390 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 MSH4O15457 936 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 BCRP11274 1271 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 PLCG1P19174 1290 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 OSBPP22059 807 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 GJA5P36382 358 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 DPYDQ12882 1025 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 SEMA3FQ13275 785 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 DPCR1Q3MIW9 517 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 HYIQ5T013 277 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 XRRA1Q6P2D8 792 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 NSMFQ6X4W1 530 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 SLC30A10Q6XR72 485 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 RIOX2Q8IUF8 465 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 BPIFA3Q9BQP9 254 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 CBX8Q9HC52 389 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 KBTBD4Q9NVX7 518 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 FBXO40Q9UH90 709 aa12.68□□□□□ -0.38
CACNB3-224ENST00000552812 KDM3AQ9Y4C1 1321 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 GTPBP6O43824 516 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-224ENST00000552812 CELF2O95319 508 aaKnown RBP12.67□□□□□ -0.38
CACNB3-224ENST00000552812 AFMP43652 599 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 HERVK_113P62684 666 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 FMR1Q06787 632 aaKnown RBP eCLIP12.67□□□□□ -0.38
CACNB3-224ENST00000552812 SPIRE1Q08AE8 756 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 BAATQ14032 418 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-224ENST00000552812 PLS1Q14651 629 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 C11orf57Q6ZUT1 292 aaPredicted RBP12.67□□□□□ -0.38
CACNB3-224ENST00000552812 PLA2G4DQ86XP0 818 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 GRAMD1CQ8IYS0 662 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 CYP2W1Q8TAV3 490 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 SNX29Q8TEQ0 813 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 CDK5RAP3Q96JB5 506 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
CACNB3-224ENST00000552812 BIN1O00499 593 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 CETPP11597 493 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 COPB2P35606 906 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 GTF2A2P52657 109 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 GRB10Q13322 594 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 GPAT2Q6NUI2 795 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 ERMNQ8TAM6 284 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 GTF3C2Q8WUA4 911 aaPredicted RBP12.66□□□□□ -0.38
CACNB3-224ENST00000552812 SLC5A5Q92911 643 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 TAAR1Q96RJ0 339 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 RMDN3Q96TC7 470 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 MTRQ99707 1265 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 A1CFQ9NQ94 594 aaKnown RBP12.66□□□□□ -0.38
CACNB3-224ENST00000552812 PXMP2Q9NR77 195 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 MAN1B1Q9UKM7 699 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 PNMA3Q9UL41 463 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 SLC45A1Q9Y2W3 748 aa12.66□□□□□ -0.38
CACNB3-224ENST00000552812 ZBTB48P10074 688 aaPredicted RBP12.65□□□□□ -0.38
CACNB3-224ENST00000552812 UBXN2AP68543 259 aa12.65□□□□□ -0.38
CACNB3-224ENST00000552812 AMPD3Q01432 767 aa12.65□□□□□ -0.38
CACNB3-224ENST00000552812 MORC3Q14149 939 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms