RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 USP50Q70EL3 339 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-216ENST00000552341 ILDR2Q71H61 639 aa12.15□□□□□ -0.46
PFDN5-216ENST00000552341 CATSPER3Q86XQ3 398 aa12.15□□□□□ -0.46
PFDN5-216ENST00000552341 SULF1Q8IWU6 871 aa12.15□□□□□ -0.46
PFDN5-216ENST00000552341 SLC5A5Q92911 643 aa12.15□□□□□ -0.46
PFDN5-216ENST00000552341 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
PFDN5-216ENST00000552341 MAP3K20Q9NYL2 800 aaKnown RBP12.15□□□□□ -0.46
PFDN5-216ENST00000552341 MAPK8IP1Q9UQF2 711 aa12.15□□□□□ -0.46
PFDN5-216ENST00000552341 RIPK3Q9Y572 518 aa12.15□□□□□ -0.46
PFDN5-216ENST00000552341 PVALEFA0A1B0GWK0 134 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 E9PMD0 336 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 ZBED4O75132 1171 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 RPA1P27694 616 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 PMS1P54277 932 aaKnown RBP12.14□□□□□ -0.47
PFDN5-216ENST00000552341 ASIC1P78348 528 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 COBLL1Q53SF7 1204 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 B3GNT9Q6UX72 402 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 OTOP1Q7RTM1 612 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 KRT26Q7Z3Y9 468 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 MCF2L2Q86YR7 1114 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 SAMD3Q8N6K7 520 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 IL31RAQ8NI17 732 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-216ENST00000552341 NELFBQ8WX92 580 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 DNAJC19Q96DA6 116 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 IMPACTQ9P2X3 320 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 PNMA2Q9UL42 364 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 ZNF214Q9UL59 606 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-216ENST00000552341 PYCARDQ9ULZ3 195 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 KIAA1024Q9UPX6 916 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 EML1O00423 815 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 CBFA2T2O43439 604 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 COBLO75128 1261 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 FCER1AP12319 257 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 OAZ1P54368 228 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 RPS6P62753 249 aaKnown RBP12.14□□□□□ -0.47
PFDN5-216ENST00000552341 PDE4DQ08499 809 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 COG2Q14746 738 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 SLC30A10Q6XR72 485 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 UNC13DQ70J99 1090 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 FILIP1Q7Z7B0 1213 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 LRRC8AQ8IWT6 810 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 KIAA0895Q8NCT3 520 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 ZC3H15Q8WU90 426 aaKnown RBP12.14□□□□□ -0.47
PFDN5-216ENST00000552341 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 DDX12PQ92771 950 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-216ENST00000552341 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 EHMT1Q9H9B1 1298 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 HOMER2Q9NSB8 354 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 LOC285556D6RIA3 1793 aa12.14□□□□□ -0.47
PFDN5-216ENST00000552341 A0A1B0GTH6 734 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 POTEFA5A3E0 1075 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 LRRC10BA6NIK2 292 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 ATP2A1O14983 1001 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 POTEIP0CG38 1075 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 ARP10275 920 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 ITGB5P18084 799 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 EPHX2P34913 555 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 MRPS9P82933 396 aaKnown RBP12.13□□□□□ -0.47
PFDN5-216ENST00000552341 PPP2R5CQ13362 524 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 NR1I3Q14994 352 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 TMEM132BQ14DG7 1078 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 NCAPH2Q6IBW4 605 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 MTERF4Q7Z6M4 381 aaKnown RBP12.13□□□□□ -0.47
PFDN5-216ENST00000552341 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 VSTM4Q8IW00 320 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 KIAA1524Q8TCG1 905 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 HPS3Q969F9 1004 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 MXRA8Q9BRK3 442 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 POLR3CQ9BUI4 534 aaPredicted RBP12.13□□□□□ -0.47
PFDN5-216ENST00000552341 RABGAP1Q9Y3P9 1069 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 SCN4AP35499 1836 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 MYPNQ86TC9 1320 aa12.13□□□□□ -0.47
PFDN5-216ENST00000552341 TRIM49BA6NDI0 452 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 GLTPD2A6NH11 291 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 PPP1R12BO60237 982 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 PLA2G4BP0C869 781 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 BCRP11274 1271 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 CDK11BP21127 795 aaKnown RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 SLC12A3P55017 1021 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 PSMC6P62333 389 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 HAUS3Q68CZ6 603 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 TMC6Q7Z403 805 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 HSD17B14Q9BPX1 270 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 EXOC1Q9NV70 894 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 ADD3Q9UEY8 706 aaKnown RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 A0A0G2JMZ2 1700 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
PFDN5-216ENST00000552341 CYP11B2P19099 503 aa12.12□□□□□ -0.47
PFDN5-216ENST00000552341 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms