RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 TSKSQ9UJT2 592 aa13.46□□□□□ -0.25
ERBB3-219ENST00000551242 EME2A4GXA9 379 aaPredicted RBP13.46□□□□□ -0.26
ERBB3-219ENST00000551242 DRD4P21917 467 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 BRD2P25440 801 aaKnown RBP13.46□□□□□ -0.26
ERBB3-219ENST00000551242 EVX2Q03828 476 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 ARID5AQ03989 594 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 HGSNATQ68CP4 663 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 EGFL6Q8IUX8 553 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 RNF10Q8N5U6 811 aaKnown RBP13.46□□□□□ -0.26
ERBB3-219ENST00000551242 SPDL1Q96EA4 605 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 MTA3Q9BTC8 594 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 PACSIN1Q9BY11 444 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 TRIM9Q9C026 710 aa13.46□□□□□ -0.26
ERBB3-219ENST00000551242 PPIP5K2O43314 1243 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 DNAJC8O75937 253 aaPredicted RBP13.45□□□□□ -0.26
ERBB3-219ENST00000551242 GNAT2P19087 354 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 TNNC1P63316 161 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 TBC1D1Q86TI0 1168 aaPredicted RBP13.45□□□□□ -0.26
ERBB3-219ENST00000551242 KIAA0895Q8NCT3 520 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 C3orf20Q8ND61 904 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 KIF9Q9HAQ2 790 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 RBM28Q9NW13 759 aaKnown RBP13.45□□□□□ -0.26
ERBB3-219ENST00000551242 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.45□□□□□ -0.26
ERBB3-219ENST00000551242 TIAM2Q8IVF5 1701 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 KCNK3O14649 394 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 TRIM37O94972 964 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 CTSWP56202 376 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 PUM3Q15397 648 aaKnown RBP13.45□□□□□ -0.26
ERBB3-219ENST00000551242 KRT71Q3SY84 523 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 MEI1Q5TIA1 1274 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 PDXDC1Q6P996 788 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 LRP2BPQ9P2M1 347 aa13.45□□□□□ -0.26
ERBB3-219ENST00000551242 CLSTN1O94985 981 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 MYBP10242 640 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 BCAMP50895 628 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 BIRC3Q13489 604 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 RUFY4Q6ZNE9 571 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 TANGO6Q9C0B7 1094 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 DDX47Q9H0S4 455 aaKnown RBP13.44□□□□□ -0.26
ERBB3-219ENST00000551242 KDM4CQ9H3R0 1056 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 GRID2IPA4D2P6 1211 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 CCT8L1PA6NM43 557 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 ORC4O43929 436 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 TLR2O60603 784 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 ANP32DO95626 131 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 GRIK3Q13003 919 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 INF2Q27J81 1249 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 NBPF9Q3BBW0 867 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 DNAAF5Q86Y56 855 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 BLIDQ8IZY5 108 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 RNF217Q8TC41 542 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 ZNF483Q8TF39 744 aaPredicted RBP13.44□□□□□ -0.26
ERBB3-219ENST00000551242 LMBR1Q8WVP7 490 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 TBC1D5Q92609 795 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 LRRC45Q96CN5 670 aa13.44□□□□□ -0.26
ERBB3-219ENST00000551242 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.44□□□□□ -0.26
ERBB3-219ENST00000551242 DAPK3O43293 454 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 CTNND1O60716 968 aaKnown RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 CYP7A1P22680 504 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 SLC8A3P57103 927 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 INHBEP58166 350 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 IRX1P78414 480 aaPredicted RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 NAB2Q15742 525 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 KIAA0753Q2KHM9 967 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 FAM133BQ5BKY9 247 aaKnown RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 STAG2Q8N3U4 1231 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 MAB21L3Q8N8X9 362 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 CCDC63Q8NA47 563 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 HOOK2Q96ED9 719 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 CEP104O60308 925 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 PAEPP09466 180 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 PFKFB3Q16875 520 aaPredicted RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 C11orf91Q3C1V1 193 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 CCDC84Q86UT8 332 aaPredicted RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 CHMP6Q96FZ7 201 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 EBF2Q9HAK2 575 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 PANK4Q9NVE7 773 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 MYH7BA7E2Y1 1941 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 IRS4O14654 1257 aaPredicted RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 SART1O43290 800 aaKnown RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 SARNPP82979 210 aaKnown RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 MAN2A1Q16706 1144 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 TXNRD1Q16881 649 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 RCSD1Q6JBY9 416 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 BZW1Q7L1Q6 419 aaKnown RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 CCDC197Q8NCU1 140 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 XPO6Q96QU8 1125 aaKnown RBP13.43□□□□□ -0.26
ERBB3-219ENST00000551242 ABCF2Q9UG63 623 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 TMEM59LQ9UK28 342 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 PNMA2Q9UL42 364 aa13.43□□□□□ -0.26
ERBB3-219ENST00000551242 A0A087X0T9 212 aa13.42□□□□□ -0.26
ERBB3-219ENST00000551242 MYL1P05976 194 aa13.42□□□□□ -0.26
ERBB3-219ENST00000551242 FAM228BP0C875 321 aa13.42□□□□□ -0.26
ERBB3-219ENST00000551242 GHRP10912 638 aa13.42□□□□□ -0.26
ERBB3-219ENST00000551242 FGFR2P21802 821 aa13.42□□□□□ -0.26
ERBB3-219ENST00000551242 TRIM28Q13263 835 aaKnown RBP13.42□□□□□ -0.26
ERBB3-219ENST00000551242 ZKSCAN8Q15776 578 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms