RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 CDV3Q9UKY7 258 aaKnown RBP13.48□□□□□ -0.25
GPN3-208ENST00000550974 NR2E1Q9Y466 385 aa13.48□□□□□ -0.25
GPN3-208ENST00000550974 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 ITGB1P05556 798 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 ASGR2P07307 311 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 BMP3P12645 472 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 PDE6AP16499 860 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 PSEN2P49810 448 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 PDE4DQ08499 809 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 DHX37Q8IY37 1157 aaKnown RBP13.47□□□□□ -0.25
GPN3-208ENST00000550974 STK11IPQ8N1F8 1099 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 VN1R2Q8NFZ6 395 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 MICAL1Q8TDZ2 1067 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 ATP8A2Q9NTI2 1148 aa13.47□□□□□ -0.25
GPN3-208ENST00000550974 C2CD4DB7Z1M9 353 aa13.46□□□□□ -0.25
GPN3-208ENST00000550974 ARIH2O95376 493 aa13.46□□□□□ -0.25
GPN3-208ENST00000550974 NPR3P17342 541 aa13.46□□□□□ -0.25
GPN3-208ENST00000550974 STAT2P52630 851 aa13.46□□□□□ -0.25
GPN3-208ENST00000550974 ZC3H14Q6PJT7 736 aaKnown RBP13.46□□□□□ -0.25
GPN3-208ENST00000550974 CHST3Q7LGC8 479 aa13.46□□□□□ -0.25
GPN3-208ENST00000550974 RPAP2Q8IXW5 612 aaPredicted RBP13.46□□□□□ -0.25
GPN3-208ENST00000550974 P2RX5Q93086 422 aa13.46□□□□□ -0.25
GPN3-208ENST00000550974 RTP3Q9BQQ7 232 aa13.46□□□□□ -0.25
GPN3-208ENST00000550974 S1PR5Q9H228 398 aa13.46□□□□□ -0.25
GPN3-208ENST00000550974 GNAI3P08754 354 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 HIC1Q14526 733 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 MFSD10Q14728 455 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 KIAA0753Q2KHM9 967 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 KLHL23Q8NBE8 558 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 KATNAL1Q9BW62 490 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 CCPG1Q9ULG6 757 aa13.45□□□□□ -0.26
GPN3-208ENST00000550974 LOC102724159A0A0B4J2E5 919 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 PTPDC1A2A3K4 754 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 PPFIA3O75145 1194 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 CTSHP09668 335 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 CALML3P27482 149 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 TECP42680 631 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 PWP2Q15269 919 aaKnown RBP13.44□□□□□ -0.26
GPN3-208ENST00000550974 FAM160B2Q86V87 743 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 CHURC1Q8WUH1 139 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 STAG1Q8WVM7 1258 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 RTKNQ9BST9 563 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 MKNK2Q9HBH9 465 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 SMC4Q9NTJ3 1288 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 NCDNQ9UBB6 729 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 CDH22Q9UJ99 828 aa13.44□□□□□ -0.26
GPN3-208ENST00000550974 USP24Q9UPU5 2620 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 LCTP09848 1927 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 STK25O00506 426 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 MBD4O95243 580 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 GH1P01241 217 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 SRGAP2BP0DMP2 458 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 RASA1P20936 1047 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 DGKDQ16760 1214 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 LY6KQ17RY6 165 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 NAALADL2Q58DX5 795 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 ANKRD54Q6NXT1 300 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 CRIPAKQ8N1N5 446 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 GMCL1P1Q8NEA9 526 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 APBB2Q92870 758 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 MPHOSPH6Q99547 160 aaKnown RBP13.43□□□□□ -0.26
GPN3-208ENST00000550974 RC3H2Q9HBD1 1191 aaKnown RBP13.43□□□□□ -0.26
GPN3-208ENST00000550974 LIMD1Q9UGP4 676 aa13.43□□□□□ -0.26
GPN3-208ENST00000550974 NOB1Q9ULX3 412 aaKnown RBP13.43□□□□□ -0.26
GPN3-208ENST00000550974 MRPL42Q9Y6G3 142 aaKnown RBP13.43□□□□□ -0.26
GPN3-208ENST00000550974 TCRBV5S4A2TA0A5A2 114 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 PRR5-ARHGAP8B1AHC4 643 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 NFIBO00712 420 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 ZNF286BP0CG31 522 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 ARHGAP8P85298 464 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 ARHGAP1Q07960 439 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 DUSP6Q16828 381 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 PPM1JQ5JR12 505 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 SYCE2Q6PIF2 218 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 SLC30A10Q6XR72 485 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 SERINC5Q86VE9 423 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 SUMF1Q8NBK3 374 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 MKL1Q969V6 931 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 EAF2Q96CJ1 260 aaPredicted RBP13.42□□□□□ -0.26
GPN3-208ENST00000550974 ZNF689Q96CS4 500 aaPredicted RBP13.42□□□□□ -0.26
GPN3-208ENST00000550974 POMKQ9H5K3 350 aa13.42□□□□□ -0.26
GPN3-208ENST00000550974 CEP250Q9BV73 2442 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 HAS3O00219 553 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 SP9P0CG40 484 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 TTF1Q15361 905 aaPredicted RBP13.41□□□□□ -0.26
GPN3-208ENST00000550974 SLFNL1Q499Z3 407 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
GPN3-208ENST00000550974 LLGL2Q6P1M3 1020 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 SIX5Q8N196 739 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 GPR161Q8N6U8 529 aaKnown RBP13.41□□□□□ -0.26
GPN3-208ENST00000550974 CEP95Q96GE4 821 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 CDCA3Q99618 268 aaPredicted RBP13.41□□□□□ -0.26
GPN3-208ENST00000550974 ERVK-5Q9HDB9 667 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 FBXL21Q9UKT6 434 aa13.41□□□□□ -0.26
GPN3-208ENST00000550974 BAZ2AQ9UIF9 1905 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms