RNA–Protein interactions for RNA: ENST00000546962.5

TMEM116-204, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-204ENST00000546962 FAM117BQ6P1L5 589 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 SLCO4C1Q6ZQN7 724 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 CYFIP1Q7L576 1253 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 HDXQ7Z353 690 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 C12orf40Q86WS4 652 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 FAM43AQ8N2R8 423 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 C19orf47Q8N9M1 422 aaKnown RBP3.83□□□□□ -1.8
TMEM116-204ENST00000546962 ZSCAN1Q8NBB4 408 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 GALNT11Q8NCW6 608 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 MYLIPQ8WY64 445 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 ACDQ96AP0 544 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 ATG4CQ96DT6 458 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 ASB2Q96Q27 587 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 UHRF1Q96T88 793 aaPredicted RBP3.83□□□□□ -1.8
TMEM116-204ENST00000546962 TM9SF2Q99805 663 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 FANCLQ9NW38 375 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 REV1Q9UBZ9 1251 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 GDF2Q9UK05 429 aaPredicted RBP3.83□□□□□ -1.8
TMEM116-204ENST00000546962 CSADQ9Y600 493 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 ADGRA2Q96PE1 1338 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 CEMIPQ8WUJ3 1361 aa3.83□□□□□ -1.8
TMEM116-204ENST00000546962 COL1A1P02452 1464 aaPredicted RBP3.83□□□□□ -1.8
TMEM116-204ENST00000546962 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 ESYT3A0FGR9 886 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 UPK3BL1B0FP48 263 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 UPK3BL2E5RIL1 263 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 M0R082 166 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 EIF4EBP3O60516 100 aaPredicted RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 LILRB5O75023 590 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 SASH1O94885 1247 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 DLGAP3O95886 979 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 ACRP10323 421 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 MYL6BP14649 208 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 NME1P15531 152 aaKnown RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 PLCG1P19174 1290 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 GUCY2CP25092 1073 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 SMAD3P84022 425 aaKnown RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 PRKCZQ05513 592 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 SNAPC2Q13487 334 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 TNFAIP1Q13829 316 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 COL9A3Q14050 684 aaPredicted RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 PDE3AQ14432 1141 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 SUZ12Q15022 739 aaKnown RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 TAF7Q15545 349 aaPredicted RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 ZYXQ15942 572 aaKnown RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 PTPROQ16827 1216 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 ZC3H12AQ5D1E8 599 aaKnown RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 TMEM31Q5JXX7 168 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 MRM1Q6IN84 353 aaKnown RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 C17orf99Q6UX52 265 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 C6orf15Q6UXA7 325 aaPredicted RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 UNC5AQ6ZN44 842 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 Q6ZNB5 142 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 SPATC1Q76KD6 591 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 NLRP10Q86W26 655 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 WFDC8Q8IUA0 241 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 NPAS3Q8IXF0 933 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 FAM178BQ8IXR5 827 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 DMRTC2Q8IXT2 367 aaPredicted RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 ZNF417Q8TAU3 575 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 PNISRQ8TF01 805 aaKnown RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 TMEM40Q8WWA1 233 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 EDARADDQ8WWZ3 215 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 CELF1Q92879 486 aaKnown RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 BTBD6Q96KE9 485 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 ZNF587Q96SQ5 575 aaPredicted RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 LRFN3Q9BTN0 628 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 C11orf49Q9H6J7 331 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 PAK6Q9NQU5 681 aaPredicted RBP3.82□□□□□ -1.8
TMEM116-204ENST00000546962 IFT57Q9NWB7 429 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 FZD1Q9UP38 647 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 LEMD3Q9Y2U8 911 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 TACC3Q9Y6A5 838 aa3.82□□□□□ -1.8
TMEM116-204ENST00000546962 KIF20BQ96Q89 1820 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 MKI67P46013 3256 aaKnown RBP3.81□□□□□ -1.8
TMEM116-204ENST00000546962 ZNF804BA4D1E1 1349 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 XDHP47989 1333 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 LOC100289279A0A1B0GTE1 492 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 CHURC1-FNTBB4DL54 471 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 BTBD19C9JJ37 291 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 TNFRSF10CO14798 259 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 HTATSF1O43719 755 aaKnown RBP3.81□□□□□ -1.8
TMEM116-204ENST00000546962 ADAM11O75078 769 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 CDC45O75419 566 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 VSIG8P0DPA2 414 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 FLT3LGP49771 235 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 MRE11P49959 708 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 NLRP12P59046 1061 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 KRT76Q01546 638 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 SRSF11Q05519 484 aaKnown RBP3.81□□□□□ -1.8
TMEM116-204ENST00000546962 RING1Q06587 406 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 MTERF2Q49AM1 385 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 TMEM201Q5SNT2 666 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 DACT2Q5SW24 774 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 NBPF12Q5TAG4 269 aaPredicted RBP3.81□□□□□ -1.8
TMEM116-204ENST00000546962 CDCP2Q5VXM1 449 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 TTLL5Q6EMB2 1281 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 OVOS1Q6IE37 1185 aa3.81□□□□□ -1.8
TMEM116-204ENST00000546962 CHSY3Q70JA7 882 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms