RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 SPIRE1Q08AE8 756 aa18.55■□□□□ 0.56
CHFR-224ENST00000545046 DCAF15Q66K64 600 aa18.55■□□□□ 0.56
CHFR-224ENST00000545046 POTEBQ6S5H4 581 aa18.55■□□□□ 0.56
CHFR-224ENST00000545046 HPS3Q969F9 1004 aa18.55■□□□□ 0.56
CHFR-224ENST00000545046 PPP1R13BQ96KQ4 1090 aa18.55■□□□□ 0.56
CHFR-224ENST00000545046 ASTN2O75129 1339 aaPredicted RBP18.55■□□□□ 0.56
CHFR-224ENST00000545046 MED24O75448 989 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 UBXN1Q04323 297 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 GUF1Q8N442 669 aaKnown RBP18.54■□□□□ 0.56
CHFR-224ENST00000545046 CPLX3Q8WVH0 158 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 HOOK2Q96ED9 719 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 ZSCAN12O43309 604 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 ICAM1P05362 532 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 TRIM14Q14142 442 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 CNGA4Q8IV77 575 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 ZNF592Q92610 1267 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 DNAJC19Q96DA6 116 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 PANK4Q9NVE7 773 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 CCPG1Q9ULG6 757 aa18.54■□□□□ 0.56
CHFR-224ENST00000545046 RPA1P27694 616 aa18.53■□□□□ 0.56
CHFR-224ENST00000545046 NBPF12Q5TAG4 269 aaPredicted RBP18.53■□□□□ 0.56
CHFR-224ENST00000545046 CENPPQ6IPU0 288 aa18.53■□□□□ 0.56
CHFR-224ENST00000545046 CATSPER3Q86XQ3 398 aa18.53■□□□□ 0.56
CHFR-224ENST00000545046 CCDC65Q8IXS2 484 aa18.53■□□□□ 0.56
CHFR-224ENST00000545046 NLGN2Q8NFZ4 835 aa18.53■□□□□ 0.56
CHFR-224ENST00000545046 NAA15Q9BXJ9 866 aaKnown RBP18.53■□□□□ 0.56
CHFR-224ENST00000545046 ZNF541Q9H0D2 1346 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 IGLV3-22A0A075B6J6 115 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 PES1O00541 588 aaKnown RBP18.52■□□□□ 0.56
CHFR-224ENST00000545046 FGFR1OPO95684 399 aaKnown RBP18.52■□□□□ 0.56
CHFR-224ENST00000545046 TUBB4AP04350 444 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 COASYQ13057 564 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 GPBP1Q86WP2 473 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 APOBEC3FQ8IUX4 373 aaKnown RBP18.52■□□□□ 0.56
CHFR-224ENST00000545046 CYP2W1Q8TAV3 490 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 CCDC51Q96ER9 411 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.52■□□□□ 0.56
CHFR-224ENST00000545046 DNM3Q9UQ16 869 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 DOCK1Q14185 1865 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 LGALS16A8MUM7 142 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 DYNC1I1O14576 645 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 CASP14P31944 242 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 USP14P54578 494 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 EHHADHQ08426 723 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 AGBL1Q96MI9 1066 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 TUBGCP2Q9BSJ2 902 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 SEMA6BQ9H3T3 888 aa18.52■□□□□ 0.56
CHFR-224ENST00000545046 POTEFA5A3E0 1075 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 RIOK3O14730 519 aaKnown RBP18.51■□□□□ 0.55
CHFR-224ENST00000545046 MFAP3LO75121 409 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 KRT18P05783 430 aaKnown RBP18.51■□□□□ 0.55
CHFR-224ENST00000545046 POTEIP0CG38 1075 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 PRKCSHP14314 528 aaPredicted RBP18.51■□□□□ 0.55
CHFR-224ENST00000545046 POTEGQ6S5H5 508 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 POTEEQ6S8J3 1075 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 MB21D1Q8N884 522 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
CHFR-224ENST00000545046 VAV3Q9UKW4 847 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 RABGAP1Q9Y3P9 1069 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 CTDP1Q9Y5B0 961 aaPredicted RBP18.51■□□□□ 0.55
CHFR-224ENST00000545046 GYPCP04921 128 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 MTIF2P46199 727 aaKnown RBP18.51■□□□□ 0.55
CHFR-224ENST00000545046 DNM2P50570 870 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 LRRC63Q05C16 580 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 MCF2L2Q86YR7 1114 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 TSG101Q99816 390 aa18.51■□□□□ 0.55
CHFR-224ENST00000545046 POLR3CQ9BUI4 534 aaPredicted RBP18.51■□□□□ 0.55
CHFR-224ENST00000545046 ZNF536O15090 1300 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 DICER1Q9UPY3 1922 aaKnown RBP18.5■□□□□ 0.55
CHFR-224ENST00000545046 A0A1W2PQC6 194 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 SPATA31C1P0DKV0 1188 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 CYP11B2P19099 503 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 GTF2F1P35269 517 aaKnown RBP eCLIP18.5■□□□□ 0.55
CHFR-224ENST00000545046 SLC12A3P55017 1021 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 UBXN2AP68543 259 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 FAM26FQ5R3K3 315 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 ANGEL2Q5VTE6 544 aaKnown RBP18.5■□□□□ 0.55
CHFR-224ENST00000545046 MYOCDQ8IZQ8 938 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 KCTD17Q8N5Z5 321 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 KIF18AQ8NI77 898 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 WDR18Q9BV38 432 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 AS3MTQ9HBK9 375 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 PITPNM2Q9BZ72 1349 aa18.5■□□□□ 0.55
CHFR-224ENST00000545046 HSD17B4P51659 736 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 MTMR2Q13614 643 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 CEP55Q53EZ4 464 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 LRCH2Q5VUJ6 765 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 SCYL3Q8IZE3 742 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 EIF2AK1Q9BQI3 630 aaKnown RBP18.49■□□□□ 0.55
CHFR-224ENST00000545046 PPP2R2CQ9Y2T4 447 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 FLOT1O75955 427 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 SETQ01105 290 aaPredicted RBP18.49■□□□□ 0.55
CHFR-224ENST00000545046 ARHGAP27Q6ZUM4 889 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 CPXCR1Q8N123 301 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 SYT2Q8N9I0 419 aaPredicted RBP18.49■□□□□ 0.55
CHFR-224ENST00000545046 ZNF507Q8TCN5 953 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 SLC5A5Q92911 643 aa18.49■□□□□ 0.55
CHFR-224ENST00000545046 ZNF112Q9UJU3 913 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms