RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 DNM2P50570 870 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 IRX3P78415 501 aaPredicted RBP17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 TDRD12Q587J7 1177 aaKnown RBP17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 GPBP1Q86WP2 473 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 C7orf25Q9BPX7 421 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 PYM1Q9BRP8 204 aaKnown RBP17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 ABCB6Q9NP58 842 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.53■□□□□ 0.47e-7■■■■■ 37.1
SNRNP70-203ENST00000544278 F5H6K3 240 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 KLRC3Q07444 240 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 DGKZQ13574 1117 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 CCDC40Q4G0X9 1142 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 DEF6Q9H4E7 631 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 THAP9Q9H5L6 903 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 RGL1Q9NZL6 768 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 CALCOCO1Q9P1Z2 691 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 A0A1W2PRG0 241 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 LRRC53A6NM62 1247 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 ZRANB2O95218 330 aaKnown RBP eCLIP17.53■□□□□ 0.43e-7■■■□□ 16.7
SNRNP70-203ENST00000544278 MOCS3O95396 460 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 EEF1GP26641 437 aaKnown RBP17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 POLD1P28340 1107 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 OAS2P29728 719 aaKnown RBP17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 COASYQ13057 564 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 LONRF2Q1L5Z9 754 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 ACER1Q8TDN7 264 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 NAA15Q9BXJ9 866 aaKnown RBP17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 NDST4Q9H3R1 872 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 ITIH6Q6UXX5 1313 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 EIF4A3P38919 411 aaKnown RBP17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 KCNA1Q09470 495 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 CNNM4Q6P4Q7 775 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 MAEAQ7L5Y9 396 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 PIGOQ8TEQ8 1089 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 NOC3LQ8WTT2 800 aaKnown RBP17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 DHTKD1Q96HY7 919 aaPredicted RBP17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 ANO3Q9BYT9 981 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 ARFGAP3Q9NP61 516 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 PANK4Q9NVE7 773 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 MYO6Q9UM54 1294 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 CAPN11Q9UMQ6 739 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 SPATA31A6Q5VVP1 1343 aa17.52■□□□□ 0.4
SNRNP70-203ENST00000544278 NPR1P16066 1061 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 AMPD3Q01432 767 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 GFPT1Q06210 699 aaPredicted RBP17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 PLS1Q14651 629 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 CAGE1Q8TC20 777 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 CCDC42Q96M95 316 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 AK8Q96MA6 479 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 GOLPH3Q9H4A6 298 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 VEZTQ9HBM0 779 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 CAPN6Q9Y6Q1 641 aa17.52■□□□□ 0.39
SNRNP70-203ENST00000544278 IGKV6D-41A0A0C4DH26 115 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 CFBP00751 764 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 FAM193AP78312 1265 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 RIC8AQ9NPQ8 531 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 ZNHIT6Q9NWK9 470 aaKnown RBP17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 ARHGAP20Q9P2F6 1191 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 H3BQF6 201 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 LAD1O00515 517 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 AKR1B10O60218 316 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 ACTN1P12814 892 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 MRPL12P52815 198 aaKnown RBP17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 C2orf54Q08AI8 447 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 EZH2Q15910 746 aaKnown RBP17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 KIAA1755Q5JYT7 1200 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 CTAGE15A4D2H0 777 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 DDX39AO00148 427 aaKnown RBP17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 PDE2AO00408 941 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 NDUFB10O96000 172 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 CTAGE8P0CG41 777 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 CACNA2D4Q7Z3S7 1137 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 CTAGE6Q86UF2 777 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 CTAGE4Q8IX94 777 aa17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 GPR161Q8N6U8 529 aaKnown RBP17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 PROCA1Q8NCQ7 364 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 PACSIN2Q9UNF0 486 aaPredicted RBP17.51■□□□□ 0.39
SNRNP70-203ENST00000544278 CLIC2O15247 247 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 UNC13DQ70J99 1090 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 C10orf67Q8IYJ2 551 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 PDE11AQ9HCR9 933 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 SALL4Q9UJQ4 1053 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 FAM86B1E9PN63 330 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 PRPF6O94906 941 aaKnown RBP17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 FAM86B2P0C5J1 330 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 PLA2G4BP0C869 781 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 SNHG28P0DPA3 235 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 FAM26FQ5R3K3 315 aa17.5■□□□□ 0.39
SNRNP70-203ENST00000544278 BICDL2A1A5D9 508 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 IPO7O95373 1038 aaKnown RBP17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 SMC1AQ14683 1233 aaKnown RBP17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 VWA3BQ502W6 1294 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 NLGN1Q8N2Q7 840 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 DNAJC7Q99615 494 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 GLIS2Q9BZE0 524 aaPredicted RBP17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 FBXO28Q9NVF7 368 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 NHSQ6T4R5 1651 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 RASSF7Q02833 373 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms