RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 FXR1P51114 621 aaKnown RBP eCLIP19.02■□□□□ 0.63
PTPRO-209ENST00000543886 NCAPH2Q6IBW4 605 aa19.02■□□□□ 0.63
PTPRO-209ENST00000543886 CENPPQ6IPU0 288 aa19.02■□□□□ 0.63
PTPRO-209ENST00000543886 TUBGCP2Q9BSJ2 902 aa19.02■□□□□ 0.63
PTPRO-209ENST00000543886 ZNF341Q9BYN7 854 aa19.02■□□□□ 0.63
PTPRO-209ENST00000543886 GLIS2Q9BZE0 524 aaPredicted RBP19.02■□□□□ 0.63
PTPRO-209ENST00000543886 SEMA6BQ9H3T3 888 aa19.02■□□□□ 0.63
PTPRO-209ENST00000543886 BCS1LQ9Y276 419 aa19.02■□□□□ 0.63
PTPRO-209ENST00000543886 A0A1W2PQC6 194 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 SOWAHDA6NJG2 315 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 E9PMD0 336 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 CTIFO43310 598 aaKnown RBP19.01■□□□□ 0.63
PTPRO-209ENST00000543886 SPIRE1Q08AE8 756 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 COASYQ13057 564 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 TSC1Q92574 1164 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 EHMT1Q9H9B1 1298 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 PANK4Q9NVE7 773 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
PTPRO-209ENST00000543886 MED24O75448 989 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 FGFR1OPO95684 399 aaKnown RBP19.01■□□□□ 0.63
PTPRO-209ENST00000543886 MTIF2P46199 727 aaKnown RBP19.01■□□□□ 0.63
PTPRO-209ENST00000543886 DNM2P50570 870 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 ETF1P62495 437 aaKnown RBP19.01■□□□□ 0.63
PTPRO-209ENST00000543886 EHHADHQ08426 723 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 CCDC84Q86UT8 332 aaPredicted RBP19.01■□□□□ 0.63
PTPRO-209ENST00000543886 GPBP1Q86WP2 473 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 DNAJC19Q96DA6 116 aa19.01■□□□□ 0.63
PTPRO-209ENST00000543886 ABCB11O95342 1321 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 B4DLN1 442 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 MSH4O15457 936 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 CCDC175P0C221 793 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 LRRC63Q05C16 580 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 CCDC65Q8IXS2 484 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 TSG101Q99816 390 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 ABHD10Q9NUJ1 306 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 PHLPP2Q6ZVD8 1323 aa19■□□□□ 0.63
PTPRO-209ENST00000543886 POTEFA5A3E0 1075 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 PHF20L1A8MW92 1017 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 POTEIP0CG38 1075 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 POTEGQ6S5H5 508 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 POTEEQ6S8J3 1075 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 MICALL2Q8IY33 904 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 ZNF507Q8TCN5 953 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 EEF2KMTQ96G04 330 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 DESI2Q9BSY9 194 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 FBXO28Q9NVF7 368 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 SMCHD1A6NHR9 2005 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 EGFRP00533 1210 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 KRT18P05783 430 aaKnown RBP18.99■□□□□ 0.63
PTPRO-209ENST00000543886 GMPSP49915 693 aaPredicted RBP18.99■□□□□ 0.63
PTPRO-209ENST00000543886 MTF1Q14872 753 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 FAM26FQ5R3K3 315 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 CATSPER3Q86XQ3 398 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 MYOCDQ8IZQ8 938 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 DNAI1Q9UI46 699 aa18.99■□□□□ 0.63
PTPRO-209ENST00000543886 FECHP22830 423 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 RPA1P27694 616 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 LDHDQ86WU2 507 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 TMTC1Q8IUR5 882 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 TEPSINQ96N21 525 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 NOC4LQ9BVI4 516 aaKnown RBP18.98■□□□□ 0.63
PTPRO-209ENST00000543886 VAV3Q9UKW4 847 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 CD2APQ9Y5K6 639 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 GJA3Q9Y6H8 435 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 LTBP3Q9NS15 1303 aa18.98■□□□□ 0.63
PTPRO-209ENST00000543886 KRT9P35527 623 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 TRIM65Q6PJ69 517 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 RAD9BQ6WBX8 426 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 CYP2W1Q8TAV3 490 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 TBC1D5Q92609 795 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 DNM3Q9UQ16 869 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 IGLV3-22A0A075B6J6 115 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 CYP11B2P19099 503 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 SLC12A3P55017 1021 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 RASSF7Q02833 373 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 LRRC41Q15345 812 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 FKBP15Q5T1M5 1219 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 CYP26C1Q6V0L0 522 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 LPAR1Q92633 364 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 GINM1Q9NU53 330 aa18.97■□□□□ 0.63
PTPRO-209ENST00000543886 WDR46O15213 610 aaKnown RBP18.96■□□□□ 0.63
PTPRO-209ENST00000543886 PTGER2P43116 358 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 TBC1D8BQ0IIM8 1120 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 FOXR2Q6PJQ5 311 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 SAMD7Q7Z3H4 446 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 CNOT7Q9UIV1 285 aaKnown RBP18.96■□□□□ 0.63
PTPRO-209ENST00000543886 CCPG1Q9ULG6 757 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 LUC7L2Q9Y383 392 aaKnown RBP18.96■□□□□ 0.63
PTPRO-209ENST00000543886 PITPNM2Q9BZ72 1349 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 NPHP3-ACAD11A0A0J9YXS1 232 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 MEIS1O00470 390 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 CTNND1O60716 968 aaKnown RBP18.96■□□□□ 0.63
PTPRO-209ENST00000543886 ICAM1P05362 532 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 SPATA31C1P0DKV0 1188 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 INPP5BP32019 993 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 TSR1Q2NL82 804 aaKnown RBP18.96■□□□□ 0.63
PTPRO-209ENST00000543886 TBC1D10BQ4KMP7 808 aaPredicted RBP18.96■□□□□ 0.63
PTPRO-209ENST00000543886 PCMTD1Q96MG8 357 aaPredicted RBP18.96■□□□□ 0.63
PTPRO-209ENST00000543886 SLF1Q9BQI6 1058 aa18.96■□□□□ 0.63
PTPRO-209ENST00000543886 NUP58Q9BVL2 599 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms