RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 MUTYHQ9UIF7 546 aa13.86□□□□□ -0.19
COPA-205ENST00000541366 DDX41Q9UJV9 622 aaKnown RBP13.86□□□□□ -0.19
COPA-205ENST00000541366 NLRC5Q86WI3 1866 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 B4DLN1 442 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 F2P00734 622 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 AMHP03971 560 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 FGRP09769 529 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 THPOP40225 353 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 MRPL12P52815 198 aaKnown RBP13.85□□□□□ -0.19
COPA-205ENST00000541366 COL19A1Q14993 1142 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 TIGD5Q53EQ6 642 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 RPAINQ86UA6 219 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 ADHFE1Q8IWW8 467 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 TMEM192Q8IY95 271 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 CTNNA3Q9UI47 895 aa13.85□□□□□ -0.19
COPA-205ENST00000541366 RSPH10B2B2RC85 870 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 CSPG5O95196 566 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 RSPH10BP0C881 870 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 SNHG28P0DPA3 235 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 EIF2AK2P19525 551 aaKnown RBP13.84□□□□□ -0.19
COPA-205ENST00000541366 STXBP2Q15833 593 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 PLEKHG4Q58EX7 1191 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 IER5LQ5T953 404 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 FBXO11Q86XK2 927 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 DHX37Q8IY37 1157 aaKnown RBP13.84□□□□□ -0.19
COPA-205ENST00000541366 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 PRSS33Q8NF86 280 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 YME1L1Q96TA2 773 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 RMDN3Q96TC7 470 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 KCNH6Q9H252 994 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 NSUN3Q9H649 340 aaKnown RBP13.84□□□□□ -0.19
COPA-205ENST00000541366 PRKAG3Q9UGI9 489 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 ZDBF2Q9HCK1 2354 aa13.84□□□□□ -0.19
COPA-205ENST00000541366 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.83□□□□□ -0.2
COPA-205ENST00000541366 CTSHP09668 335 aa13.83□□□□□ -0.2
COPA-205ENST00000541366 GTF2F1P35269 517 aaKnown RBP eCLIP13.83□□□□□ -0.2
COPA-205ENST00000541366 HAND2P61296 217 aa13.83□□□□□ -0.2
COPA-205ENST00000541366 SERINC5Q86VE9 423 aa13.83□□□□□ -0.2
COPA-205ENST00000541366 NSUN6Q8TEA1 469 aaKnown RBP13.83□□□□□ -0.2
COPA-205ENST00000541366 TOP1MTQ969P6 601 aa13.83□□□□□ -0.2
COPA-205ENST00000541366 KATNAL1Q9BW62 490 aa13.83□□□□□ -0.2
COPA-205ENST00000541366 TCP11L1Q9NUJ3 509 aa13.83□□□□□ -0.2
COPA-205ENST00000541366 MRVI1Q9Y6F6 885 aa13.83□□□□□ -0.2
COPA-205ENST00000541366 RGS20O76081 388 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 FGAP02671 866 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 HYAL1Q12794 435 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 LAMC2Q13753 1193 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 CDC37Q16543 378 aaPredicted RBP13.82□□□□□ -0.2
COPA-205ENST00000541366 HSDL1Q3SXM5 330 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 PPTC7Q8NI37 304 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 EMID1Q96A84 441 aaPredicted RBP13.82□□□□□ -0.2
COPA-205ENST00000541366 ZFP91Q96JP5 570 aaPredicted RBP13.82□□□□□ -0.2
COPA-205ENST00000541366 MFSD14AQ96MC6 490 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 SAMD11Q96NU1 681 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 ZKSCAN3Q9BRR0 538 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 CHMP4BQ9H444 224 aaKnown RBP13.82□□□□□ -0.2
COPA-205ENST00000541366 PNMA2Q9UL42 364 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 FAM50BQ9Y247 325 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 TTC41PQ6P2S7 1318 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 MYO15AQ9UKN7 3530 aa13.82□□□□□ -0.2
COPA-205ENST00000541366 GRM6O15303 877 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 LINC01565O15544 149 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 MBTPS2O43462 519 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 NR3C2P08235 984 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 HOXD8P13378 290 aaPredicted RBP13.81□□□□□ -0.2
COPA-205ENST00000541366 ALX1Q15699 326 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 SMAD2Q15796 467 aaKnown RBP13.81□□□□□ -0.2
COPA-205ENST00000541366 CTC1Q2NKJ3 1217 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 HERC4Q5GLZ8 1057 aaPredicted RBP13.81□□□□□ -0.2
COPA-205ENST00000541366 ARHGEF16Q5VV41 709 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 MYSM1Q5VVJ2 828 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 MIER1Q8N108 512 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 IWS1Q96ST2 819 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 IFIH1Q9BYX4 1025 aaKnown RBP13.81□□□□□ -0.2
COPA-205ENST00000541366 IGFLR1Q9H665 355 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 BCAS3Q9H6U6 928 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 EMSYQ7Z589 1322 aa13.81□□□□□ -0.2
COPA-205ENST00000541366 ZFHX2Q9C0A1 2572 aaPredicted RBP13.8□□□□□ -0.2
COPA-205ENST00000541366 TREHO43280 583 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 TBX10O75333 385 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 EIF3JO75822 258 aaKnown RBP13.8□□□□□ -0.2
COPA-205ENST00000541366 MYCLP12524 364 aaPredicted RBP13.8□□□□□ -0.2
COPA-205ENST00000541366 CTNNB1P35222 781 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 SP2Q02086 613 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 QRICH1Q2TAL8 776 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 TBC1D10CQ8IV04 446 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 ADGRF4Q8IZF3 695 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 SEPT8Q92599 483 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 GPKOWQ92917 476 aaPredicted RBP eCLIP13.8□□□□□ -0.22e-6■■■■■ 37.1
COPA-205ENST00000541366 ATP6V0A1Q93050 837 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 SPATA33Q96N06 139 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 C16orf70Q9BSU1 422 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 UPF3BQ9BZI7 483 aaKnown RBP13.8□□□□□ -0.2
COPA-205ENST00000541366 PXMP2Q9NR77 195 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 ABCB11O95342 1321 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 CACNA1HO95180 2353 aa13.8□□□□□ -0.2
COPA-205ENST00000541366 MYH6P13533 1939 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms