RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 TOB2Q14106 344 aaPredicted RBP6.66□□□□□ -1.34
CDKN3-206ENST00000541304 CYB5R4Q7L1T6 521 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 ERO1BQ86YB8 467 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 ZNF654Q8IZM8 581 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 STAG2Q8N3U4 1231 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 ZNF713Q8N859 430 aaPredicted RBP6.66□□□□□ -1.34
CDKN3-206ENST00000541304 SLC44A5Q8NCS7 719 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 WASF1Q92558 559 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 CEP95Q96GE4 821 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 SUSD3Q96L08 255 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 SLC30A3Q99726 388 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 KIAA1683Q9H0B3 1180 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 SLKQ9H2G2 1235 aaPredicted RBP6.66□□□□□ -1.34
CDKN3-206ENST00000541304 GBA2Q9HCG7 927 aaPredicted RBP6.66□□□□□ -1.34
CDKN3-206ENST00000541304 CWC22Q9HCG8 908 aaKnown RBP6.66□□□□□ -1.34
CDKN3-206ENST00000541304 TFIP11Q9UBB9 837 aaKnown RBP6.66□□□□□ -1.34
CDKN3-206ENST00000541304 TMX2Q9Y320 296 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 TAF6LQ9Y6J9 622 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 ASTN2O75129 1339 aaPredicted RBP6.66□□□□□ -1.34
CDKN3-206ENST00000541304 MYH8P13535 1937 aa6.66□□□□□ -1.34
CDKN3-206ENST00000541304 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 GOLGA8AA7E2F4 631 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 USP17L10C9JJH3 530 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 CXCL11O14625 94 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 WDR46O15213 610 aaKnown RBP6.65□□□□□ -1.34
CDKN3-206ENST00000541304 SPATA31C1P0DKV0 1188 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 SNHG28P0DPA3 235 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 ZBTB48P10074 688 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-206ENST00000541304 PTPRAP18433 802 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 PDCP20941 246 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 CHRNA4P43681 627 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 TROAPQ12815 778 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 PABPC4Q13310 644 aaKnown RBP eCLIP6.65□□□□□ -1.34
CDKN3-206ENST00000541304 PPIL2Q13356 520 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 CUL4AQ13619 759 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 RAB3GAP1Q15042 981 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 RTN1Q16799 776 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 SLC4A8Q2Y0W8 1093 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 FAM47AQ5JRC9 791 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 LDLRAD1Q5T700 205 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 MAP1SQ66K74 1059 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-206ENST00000541304 MIGA2Q7L4E1 593 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 CD163Q86VB7 1156 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 ALDH16A1Q8IZ83 802 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 ZNF280CQ8ND82 737 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 GTF3C2Q8WUA4 911 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-206ENST00000541304 GTF3C6Q969F1 213 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 TMX3Q96JJ7 454 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 C12orf42Q96LP6 360 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 FEZ1Q99689 392 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 C2orf49Q9BVC5 232 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-206ENST00000541304 GLIS2Q9BZE0 524 aaPredicted RBP6.65□□□□□ -1.34
CDKN3-206ENST00000541304 MAF1Q9H063 256 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 IL17RBQ9NRM6 502 aa6.65□□□□□ -1.34
CDKN3-206ENST00000541304 MYPNQ86TC9 1320 aa6.65□□□□□ -1.35
CDKN3-206ENST00000541304 PASKQ96RG2 1323 aa6.65□□□□□ -1.35
CDKN3-206ENST00000541304 STK36Q9NRP7 1315 aa6.65□□□□□ -1.35
CDKN3-206ENST00000541304 SRCAPQ6ZRS2 3230 aa6.65□□□□□ -1.35
CDKN3-206ENST00000541304 USP2O75604 605 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 CELF2O95319 508 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 PARP1P09874 1014 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 EEF2P13639 858 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 IFNAR1P17181 557 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 XBP1P17861 261 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 PDIA3P30101 505 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 GUCY1A2P33402 732 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 ADH7P40394 386 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 SLC1A4P43007 532 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 VGLL4Q14135 290 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 GRM4Q14833 912 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 SEPT2Q15019 361 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 FASTKD5Q7L8L6 764 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 RAB44Q7Z6P3 723 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 FAM160B2Q86V87 743 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 MICU3Q86XE3 530 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 FANCBQ8NB91 859 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 ZNF526Q8TF50 670 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 CCDC12Q8WUD4 166 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 SCG3Q8WXD2 468 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 CALR3Q96L12 384 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 IPO9Q96P70 1041 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 TMEM47Q9BQJ4 181 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 PLVAPQ9BX97 442 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 SPZ1Q9BXG8 430 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 RNF26Q9BY78 433 aaPredicted RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 VCPKMTQ9H867 229 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 ZCCHC17Q9NP64 241 aaKnown RBP6.64□□□□□ -1.35
CDKN3-206ENST00000541304 TMOD4Q9NZQ9 345 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 CLIP2Q9UDT6 1046 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 TPCN1Q9ULQ1 816 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 KCNH4Q9UQ05 1017 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 SLC45A1Q9Y2W3 748 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 TACC3Q9Y6A5 838 aa6.64□□□□□ -1.35
CDKN3-206ENST00000541304 A6NJR5 290 aa6.63□□□□□ -1.35
CDKN3-206ENST00000541304 FAM196BA6NMK8 535 aa6.63□□□□□ -1.35
CDKN3-206ENST00000541304 USP17L15C9J2P7 530 aa6.63□□□□□ -1.35
CDKN3-206ENST00000541304 USP17L13C9JLJ4 530 aa6.63□□□□□ -1.35
CDKN3-206ENST00000541304 USP17L11C9JVI0 530 aa6.63□□□□□ -1.35
CDKN3-206ENST00000541304 USP17L18D6R9N7 530 aa6.63□□□□□ -1.35
CDKN3-206ENST00000541304 USP17L22D6RA61 530 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms