RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 SIAH1Q8IUQ4 282 aa9.16□□□□□ -0.94
YBX3-210ENST00000540975 PWWP2AQ96N64 755 aa9.16□□□□□ -0.94
YBX3-210ENST00000540975 SLC6A20Q9NP91 592 aa9.16□□□□□ -0.94
YBX3-210ENST00000540975 FAN1Q9Y2M0 1017 aa9.16□□□□□ -0.94
YBX3-210ENST00000540975 CCDC163A0A0D9SF12 145 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 AQP7O14520 342 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 SOD2P04179 222 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 ZSCAN22P10073 491 aaPredicted RBP9.15□□□□□ -0.94
YBX3-210ENST00000540975 GRK2P25098 689 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 GRK3P35626 688 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 C2orf27AQ580R0 203 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 LCNL1Q6ZST4 164 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 MIB1Q86YT6 1006 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 TMEM151BQ8IW70 566 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 ZSWIM2Q8NEG5 633 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 KCNJ15Q99712 375 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 SMOC1Q9H4F8 434 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 ZNF652Q9Y2D9 606 aa9.15□□□□□ -0.94
YBX3-210ENST00000540975 ETV3LQ6ZN32 361 aa9.14□□□□□ -0.95
YBX3-210ENST00000540975 NLGN1Q8N2Q7 840 aa9.14□□□□□ -0.95
YBX3-210ENST00000540975 ALG1Q9BT22 464 aa9.14□□□□□ -0.95
YBX3-210ENST00000540975 IPPKQ9H8X2 491 aa9.14□□□□□ -0.95
YBX3-210ENST00000540975 PCDHA8Q9Y5H6 950 aa9.14□□□□□ -0.95
YBX3-210ENST00000540975 FAM47E-STBD1D6RA91 191 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 KRIT1O00522 736 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 COL6A2P12110 1019 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 AFF3P51826 1226 aaKnown RBP9.13□□□□□ -0.95
YBX3-210ENST00000540975 TCERG1LQ5VWI1 586 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 OTOP3Q7RTS5 596 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 SMARCC2Q8TAQ2 1214 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 PIP4K2CQ8TBX8 421 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 PIF1Q9H611 641 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 PTCH2Q9Y6C5 1203 aa9.13□□□□□ -0.95
YBX3-210ENST00000540975 TCRBV5S2A0A599 114 aa9.12□□□□□ -0.95
YBX3-210ENST00000540975 SPIRE1Q08AE8 756 aa9.12□□□□□ -0.95
YBX3-210ENST00000540975 PAK1Q13153 545 aa9.12□□□□□ -0.95
YBX3-210ENST00000540975 FAM26EQ8N5C1 309 aa9.12□□□□□ -0.95
YBX3-210ENST00000540975 ARRDC4Q8NCT1 418 aa9.12□□□□□ -0.95
YBX3-210ENST00000540975 PCDHB4Q9Y5E5 795 aa9.12□□□□□ -0.95
YBX3-210ENST00000540975 PCDHA9Q9Y5H5 950 aa9.12□□□□□ -0.95
YBX3-210ENST00000540975 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.11□□□□□ -0.95
YBX3-210ENST00000540975 MAFKO60675 156 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 PLA2G1BP04054 148 aaKnown RBP9.11□□□□□ -0.95
YBX3-210ENST00000540975 GNAT1P11488 350 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 GUCY1A3Q02108 690 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 HABP4Q5JVS0 413 aaKnown RBP9.11□□□□□ -0.95
YBX3-210ENST00000540975 CYP4F22Q6NT55 531 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 CD300LDQ6UXZ3 194 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 MTDHQ86UE4 582 aaKnown RBP9.11□□□□□ -0.95
YBX3-210ENST00000540975 FAM126BQ8IXS8 530 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 PHOSPHO1Q8TCT1 267 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 FNIP1Q8TF40 1166 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 DDX11Q96FC9 970 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 SYT3Q9BQG1 590 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 MYOTQ9UBF9 498 aa9.11□□□□□ -0.95
YBX3-210ENST00000540975 NKRFO15226 690 aaKnown RBP eCLIP9.1□□□□□ -0.95
YBX3-210ENST00000540975 CRTAMO95727 393 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 C8BP07358 591 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 NAT1P18440 290 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 HTRA3P83110 453 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 CAP1Q01518 475 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 VMACQ2NL98 169 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 PCDH19Q8TAB3 1148 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 SLC7A14Q8TBB6 771 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 NOX5Q96PH1 765 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 KANSL2Q9H9L4 492 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 SLC52A2Q9HAB3 445 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 ASH2LQ9UBL3 628 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 NDOR1Q9UHB4 597 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 PMF1-BGLAPU3KQ54 211 aa9.1□□□□□ -0.95
YBX3-210ENST00000540975 WNT9AO14904 365 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 SLC27A2O14975 620 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 EFCAB14O75071 495 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 CYP2C8P10632 490 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 STAT5AP42229 794 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 SQSTM1Q13501 440 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 CR1LQ2VPA4 569 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 TRIM61Q5EBN2 209 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 TRIM48Q8IWZ4 208 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 RBM12BQ8IXT5 1001 aaKnown RBP9.09□□□□□ -0.95
YBX3-210ENST00000540975 GSTCDQ8NEC7 633 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 SH3TC2Q8TF17 1288 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 CLEC4DQ8WXI8 215 aa9.09□□□□□ -0.95
YBX3-210ENST00000540975 NGRNQ9NPE2 291 aaKnown RBP9.09□□□□□ -0.95
YBX3-210ENST00000540975 ARVCFO00192 962 aa9.08□□□□□ -0.96
YBX3-210ENST00000540975 KCNQ2O43526 872 aa9.08□□□□□ -0.96
YBX3-210ENST00000540975 SPOCD1Q6ZMY3 1216 aa9.08□□□□□ -0.96
YBX3-210ENST00000540975 ZC3H18Q86VM9 953 aaKnown RBP9.08□□□□□ -0.96
YBX3-210ENST00000540975 UHMK1Q8TAS1 419 aaKnown RBP9.08□□□□□ -0.96
YBX3-210ENST00000540975 TOE1Q96GM8 510 aaKnown RBP9.08□□□□□ -0.96
YBX3-210ENST00000540975 YIPF4Q9BSR8 244 aa9.08□□□□□ -0.96
YBX3-210ENST00000540975 PCDH18Q9HCL0 1135 aa9.08□□□□□ -0.96
YBX3-210ENST00000540975 DSEQ9UL01 958 aa9.08□□□□□ -0.96
YBX3-210ENST00000540975 FFAR3O14843 346 aa9.07□□□□□ -0.96
YBX3-210ENST00000540975 SRGAP2CP0DJJ0 459 aa9.07□□□□□ -0.96
YBX3-210ENST00000540975 LINC00482Q8N8I6 264 aa9.07□□□□□ -0.96
YBX3-210ENST00000540975 LINC01356Q8N9X3 169 aa9.07□□□□□ -0.96
YBX3-210ENST00000540975 FBXW5Q969U6 566 aa9.07□□□□□ -0.96
YBX3-210ENST00000540975 MAGEB10Q96LZ2 347 aaPredicted RBP9.07□□□□□ -0.96
YBX3-210ENST00000540975 GORASP1Q9BQQ3 440 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms