RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 NLGN2Q8NFZ4 835 aa10.77□□□□□ -0.68
CLIP1-212ENST00000540304 ETNPPLQ8TBG4 499 aa10.77□□□□□ -0.68
CLIP1-212ENST00000540304 DHTKD1Q96HY7 919 aaPredicted RBP10.77□□□□□ -0.68
CLIP1-212ENST00000540304 NT5C3AQ9H0P0 336 aa10.77□□□□□ -0.68
CLIP1-212ENST00000540304 ADD3Q9UEY8 706 aaKnown RBP10.77□□□□□ -0.68
CLIP1-212ENST00000540304 ZNF541Q9H0D2 1346 aa10.77□□□□□ -0.68
CLIP1-212ENST00000540304 DOCK1Q14185 1865 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 PVALEFA0A1B0GWK0 134 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 H7C1D1 291 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 CTNND1O60716 968 aaKnown RBP10.77□□□□□ -0.69
CLIP1-212ENST00000540304 CYP3A4P08684 503 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 PRR16Q569H4 304 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 CNNM4Q6P4Q7 775 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 ANKRD20A12PQ8NF67 263 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 LPAR1Q92633 364 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 DEFB129Q9H1M3 183 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 KCND1Q9NSA2 647 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 CALCOCO1Q9P1Z2 691 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 LIMA1Q9UHB6 759 aaKnown RBP10.77□□□□□ -0.69
CLIP1-212ENST00000540304 MRPL11Q9Y3B7 192 aaKnown RBP10.77□□□□□ -0.69
CLIP1-212ENST00000540304 ASTN2O75129 1339 aaPredicted RBP10.77□□□□□ -0.69
CLIP1-212ENST00000540304 ABCB11O95342 1321 aa10.77□□□□□ -0.69
CLIP1-212ENST00000540304 MYMKA6NI61 221 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 GCOM1H8Y6P7 765 aaPredicted RBP10.76□□□□□ -0.69
CLIP1-212ENST00000540304 WDR46O15213 610 aaKnown RBP10.76□□□□□ -0.69
CLIP1-212ENST00000540304 POLR2MP0CAP2 368 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 CCT6AP40227 531 aaKnown RBP10.76□□□□□ -0.69
CLIP1-212ENST00000540304 KCNJ6P48051 423 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 COBLL1Q53SF7 1204 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 UNC13DQ70J99 1090 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 LENG9Q96B70 501 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 FAM20AQ96MK3 541 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 FBXO28Q9NVF7 368 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 DICER1Q9UPY3 1922 aaKnown RBP10.76□□□□□ -0.69
CLIP1-212ENST00000540304 USP27XA6NNY8 438 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 FAM86B1E9PN63 330 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 CFBP00751 764 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 FAM86B2P0C5J1 330 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 TCP11X2Q5H9J9 407 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 FCHSD1Q86WN1 690 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 MYRIPQ8NFW9 859 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 KIAA1683Q9H0B3 1180 aa10.76□□□□□ -0.69
CLIP1-212ENST00000540304 BICDL2A1A5D9 508 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 TRIM49BA6NDI0 452 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 LRRC10BA6NIK2 292 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 KCNJ18B7U540 433 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 HOXA7P31268 230 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-212ENST00000540304 GABPB1Q06547 395 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-212ENST00000540304 STK4Q13043 487 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 KCNJ12Q14500 433 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 KRT31Q15323 416 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 ECM1Q16610 540 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 DCAF15Q66K64 600 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 HAUS3Q68CZ6 603 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 NOC3LQ8WTT2 800 aaKnown RBP10.75□□□□□ -0.69
CLIP1-212ENST00000540304 THAP9Q9H5L6 903 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 EHMT1Q9H9B1 1298 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 ERICH4A6NGS2 130 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 TEX33O43247 280 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 INPP5BP32019 993 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 ZNF76P36508 570 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 PBX1P40424 430 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 PMS1P54277 932 aaKnown RBP10.75□□□□□ -0.69
CLIP1-212ENST00000540304 SPIRE1Q08AE8 756 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 ICE2Q659A1 982 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 TTI2Q6NXR4 508 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 LDHDQ86WU2 507 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 APOBEC3FQ8IUX4 373 aaKnown RBP10.75□□□□□ -0.69
CLIP1-212ENST00000540304 CCAR2Q8N163 923 aaKnown RBP10.75□□□□□ -0.69
CLIP1-212ENST00000540304 ERMNQ8TAM6 284 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 P2RX5Q93086 422 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 HOOK2Q96ED9 719 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 TRIM47Q96LD4 638 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 C16orf45Q96MC5 204 aaPredicted RBP10.75□□□□□ -0.69
CLIP1-212ENST00000540304 SLF1Q9BQI6 1058 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 DONSONQ9NYP3 566 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 STK24Q9Y6E0 443 aa10.75□□□□□ -0.69
CLIP1-212ENST00000540304 CCDC189A1A4V9 331 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 ICAM1P05362 532 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 FCER1AP12319 257 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 CCNE1P24864 410 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 STAT3P40763 770 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 COPB1P53618 953 aaKnown RBP10.74□□□□□ -0.69
CLIP1-212ENST00000540304 NBPF12Q5TAG4 269 aaPredicted RBP10.74□□□□□ -0.69
CLIP1-212ENST00000540304 DYMQ7RTS9 669 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 PRPF38AQ8NAV1 312 aaKnown RBP10.74□□□□□ -0.69
CLIP1-212ENST00000540304 KIAA0895Q8NCT3 520 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 DDX12PQ92771 950 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
CLIP1-212ENST00000540304 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 PRIMPOLQ96LW4 560 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 ITIH6Q6UXX5 1313 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 RBBP6Q7Z6E9 1792 aaKnown RBP10.74□□□□□ -0.69
CLIP1-212ENST00000540304 POTEB3A0JP26 581 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 POTECB2RU33 542 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 N4BP3O15049 544 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 MSH4O15457 936 aa10.74□□□□□ -0.69
CLIP1-212ENST00000540304 EEF1GP26641 437 aaKnown RBP10.74□□□□□ -0.69
CLIP1-212ENST00000540304 POTEBQ6S5H4 581 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms