RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 TOP1MTQ969P6 601 aa11.59□□□□□ -0.55
PRKAB1-204ENST00000538271 SRCIN1Q9C0H9 1055 aa11.59□□□□□ -0.55
PRKAB1-204ENST00000538271 NR2E1Q9Y466 385 aa11.59□□□□□ -0.55
PRKAB1-204ENST00000538271 DSPP15924 2871 aaKnown RBP11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 USP9XQ93008 2570 aaPredicted RBP11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 KINO60870 393 aaKnown RBP11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 UPP2O95045 317 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 ASGR2P07307 311 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 CKBP12277 381 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 TGM1P22735 817 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 TAPT1Q6NXT6 567 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 PADI6Q6TGC4 694 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 PRR23BQ6ZRT6 265 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 RBM23Q86U06 439 aaKnown RBP11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 FIBCD1Q8N539 461 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 VCPKMTQ9H867 229 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 USP18Q9UMW8 372 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 VPS9D1Q9Y2B5 631 aa11.58□□□□□ -0.56
PRKAB1-204ENST00000538271 COL4A3Q01955 1670 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 MPHOSPH10O00566 681 aaKnown RBP11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 CPT1AP50416 773 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 CNTN2Q02246 1040 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 MBTPS1Q14703 1052 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 SOWAHCQ53LP3 525 aaPredicted RBP11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 PI16Q6UXB8 463 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 UNQ6494/PRO21346Q6UXR6 183 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 TTC13Q8NBP0 860 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 HMG20BQ9P0W2 317 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 DAXXQ9UER7 740 aaPredicted RBP11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 TMX2Q9Y320 296 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 RWDD3Q9Y3V2 267 aa11.57□□□□□ -0.56
PRKAB1-204ENST00000538271 SRRM3A6NNA2 597 aaPredicted RBP11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 E9PSI1 815 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 LOC400499M0QZD8 3231 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 DNAJB1P25685 340 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 PRSS12P56730 875 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 RBM10P98175 930 aaKnown RBP11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 N4BP2L1Q5TBK1 243 aaPredicted RBP11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 TRAF7Q6Q0C0 670 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 SLC4A10Q6U841 1118 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 ADGRA1Q86SQ6 560 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 SIAH1Q8IUQ4 282 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 FBXO16Q8IX29 292 aaPredicted RBP11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 NAV1Q8NEY1 1877 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 DBF4BQ8NFT6 615 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 NETO1Q8TDF5 533 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 ATP8B4Q8TF62 1192 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 SECISBP2LQ93073 1101 aaKnown RBP11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 S1PR5Q9H228 398 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 PLAGL2Q9UPG8 496 aa11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 DDX49Q9Y6V7 483 aaKnown RBP11.56□□□□□ -0.56
PRKAB1-204ENST00000538271 ASB14A6NK59 587 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 TIMM10P62072 90 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 DUSP28Q4G0W2 176 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 GDF6Q6KF10 455 aaPredicted RBP11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 NAA16Q6N069 864 aaPredicted RBP11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 EEPD1Q7L9B9 569 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 SPATA5Q8NB90 893 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 VN1R2Q8NFZ6 395 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 IL17RAQ96F46 866 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 ERVK-5Q9HDB9 667 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 PARD6AQ9NPB6 346 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
PRKAB1-204ENST00000538271 WDFY3Q8IZQ1 3526 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 CIAO1O76071 339 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 OATP04181 439 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 KIAA1211Q6ZU35 1233 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 TTC6Q86TZ1 520 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 CLEC10AQ8IUN9 316 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 CLP1Q92989 425 aaKnown RBP11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 NEK1Q96PY6 1258 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 IFIH1Q9BYX4 1025 aaKnown RBP11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 ARHGEF10LQ9HCE6 1279 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 ADGRG1Q9Y653 693 aa11.54□□□□□ -0.56
PRKAB1-204ENST00000538271 PLCD1P51178 756 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 DYNLL1P63167 89 aaKnown RBP11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 CPXCR1Q8N123 301 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 SIX5Q8N196 739 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 XAGE2Q96GT9 111 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 PLVAPQ9BX97 442 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 ANKFY1Q9P2R3 1169 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 FBXO40Q9UH90 709 aa11.53□□□□□ -0.56
PRKAB1-204ENST00000538271 IGSF10Q6WRI0 2623 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 GOLGA8CPA6NN73 597 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 USP17L12C9JPN9 530 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 USP17L21D6R901 530 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 ATP2A1O14983 1001 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 PER2O15055 1255 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 SPTLC1O15269 473 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 KPNA6O60684 536 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 CHMP4BP1P59074 171 aa11.52□□□□□ -0.57
PRKAB1-204ENST00000538271 GABPAQ06546 454 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms