RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TCRBV5S2A0A599 114 aa8.57□□□□□ -1.04
CCDC7-208ENST00000537047 MYO1BO43795 1136 aa8.57□□□□□ -1.04
CCDC7-208ENST00000537047 TNFRSF1AP19438 455 aa8.57□□□□□ -1.04
CCDC7-208ENST00000537047 ACBD5Q5T8D3 534 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-208ENST00000537047 PCDH18Q9HCL0 1135 aa8.57□□□□□ -1.04
CCDC7-208ENST00000537047 ZNF652Q9Y2D9 606 aa8.57□□□□□ -1.04
CCDC7-208ENST00000537047 COA3Q9Y2R0 106 aaPredicted RBP8.57□□□□□ -1.04
CCDC7-208ENST00000537047 HGSO14964 777 aaPredicted RBP8.56□□□□□ -1.04
CCDC7-208ENST00000537047 B4GALT3O60512 393 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 CAPNS1P04632 268 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 ZNF28P17035 718 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 LTBRP36941 435 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 GTF2A2P52657 109 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 MLLT6P55198 1093 aaPredicted RBP8.56□□□□□ -1.04
CCDC7-208ENST00000537047 NKX3-2P78367 333 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 KIAA2012Q0VF49 1180 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 TESK1Q15569 626 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 PRAMEF18Q5VWM3 479 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 STEAP3Q658P3 488 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 LGI4Q8N135 537 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 CLDND1Q9NY35 253 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 PRKAG3Q9UGI9 489 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 ST6GALNAC2Q9UJ37 374 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 PCDHB4Q9Y5E5 795 aa8.56□□□□□ -1.04
CCDC7-208ENST00000537047 TADA3O75528 432 aa8.55□□□□□ -1.04
CCDC7-208ENST00000537047 GJB6O95452 261 aa8.55□□□□□ -1.04
CCDC7-208ENST00000537047 LRG1P02750 347 aa8.55□□□□□ -1.04
CCDC7-208ENST00000537047 LSAMPQ13449 338 aa8.55□□□□□ -1.04
CCDC7-208ENST00000537047 TNNI3KQ59H18 835 aa8.55□□□□□ -1.04
CCDC7-208ENST00000537047 TEPPQ6URK8 271 aa8.55□□□□□ -1.04
CCDC7-208ENST00000537047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCDC7-208ENST00000537047 TOE1Q96GM8 510 aaKnown RBP8.55□□□□□ -1.04
CCDC7-208ENST00000537047 CDIP1Q9H305 208 aa8.55□□□□□ -1.04
CCDC7-208ENST00000537047 DTLQ9NZJ0 730 aa8.55□□□□□ -1.04
CCDC7-208ENST00000537047 ZNF536O15090 1300 aa8.54□□□□□ -1.04
CCDC7-208ENST00000537047 H7BY64 318 aa8.54□□□□□ -1.04
CCDC7-208ENST00000537047 MSCO60682 206 aa8.54□□□□□ -1.04
CCDC7-208ENST00000537047 CPP00450 1065 aa8.54□□□□□ -1.04
CCDC7-208ENST00000537047 ERCC5P28715 1186 aaPredicted RBP8.54□□□□□ -1.04
CCDC7-208ENST00000537047 IL13P35225 146 aa8.54□□□□□ -1.04
CCDC7-208ENST00000537047 SLC35F1Q5T1Q4 408 aa8.54□□□□□ -1.04
CCDC7-208ENST00000537047 CPZQ66K79 652 aa8.54□□□□□ -1.04
CCDC7-208ENST00000537047 LCORQ96JN0 433 aaPredicted RBP8.54□□□□□ -1.04
CCDC7-208ENST00000537047 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
CCDC7-208ENST00000537047 MATN3O15232 486 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 ZNF20P17024 532 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 FXNQ16595 210 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 PHF19Q5T6S3 580 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 BORAQ6PGQ7 559 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 TMC5Q6UXY8 1006 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 RBM12BQ8IXT5 1001 aaKnown RBP8.53□□□□□ -1.04
CCDC7-208ENST00000537047 ZCCHC14Q8WYQ9 949 aaKnown RBP8.53□□□□□ -1.04
CCDC7-208ENST00000537047 MBD6Q96DN6 1003 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 SAMD11Q96NU1 681 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 JAM3Q9BX67 310 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 C1QTNF3Q9BXJ4 246 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 ZNF408Q9H9D4 720 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 PPP4R1LQ9P1A2 415 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 CROTQ9UKG9 612 aa8.53□□□□□ -1.04
CCDC7-208ENST00000537047 PPP2R2AP63151 447 aa8.52□□□□□ -1.05
CCDC7-208ENST00000537047 SLC10A6Q3KNW5 377 aa8.52□□□□□ -1.05
CCDC7-208ENST00000537047 EMC4Q5J8M3 183 aa8.52□□□□□ -1.05
CCDC7-208ENST00000537047 FAM124AQ86V42 546 aa8.52□□□□□ -1.05
CCDC7-208ENST00000537047 TTC9BQ8N6N2 239 aa8.52□□□□□ -1.05
CCDC7-208ENST00000537047 CCDC140Q96MF4 163 aa8.52□□□□□ -1.05
CCDC7-208ENST00000537047 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.52□□□□□ -1.05
CCDC7-208ENST00000537047 ST7Q9NRC1 585 aa8.52□□□□□ -1.05
CCDC7-208ENST00000537047 NPFFR2Q9Y5X5 522 aa8.52□□□□□ -1.05
CCDC7-208ENST00000537047 A0A1W2PQU0 124 aa8.51□□□□□ -1.05
CCDC7-208ENST00000537047 C1QTNF3-AMACRE9PGA6 284 aa8.51□□□□□ -1.05
CCDC7-208ENST00000537047 AKAP8O43823 692 aaKnown RBP8.51□□□□□ -1.05
CCDC7-208ENST00000537047 CYP1A1P04798 512 aaPredicted RBP8.51□□□□□ -1.05
CCDC7-208ENST00000537047 ZXDAP98168 799 aa8.51□□□□□ -1.05
CCDC7-208ENST00000537047 VPS37DQ86XT2 251 aa8.51□□□□□ -1.05
CCDC7-208ENST00000537047 CELF2-AS1Q8N7Q2 184 aa8.51□□□□□ -1.05
CCDC7-208ENST00000537047 YTHDC1Q96MU7 727 aaKnown RBP8.51□□□□□ -1.05
CCDC7-208ENST00000537047 MYOTQ9UBF9 498 aa8.51□□□□□ -1.05
CCDC7-208ENST00000537047 DGKIO75912 1065 aa8.5□□□□□ -1.05
CCDC7-208ENST00000537047 FGRP09769 529 aa8.5□□□□□ -1.05
CCDC7-208ENST00000537047 RBM10P98175 930 aaKnown RBP8.5□□□□□ -1.05
CCDC7-208ENST00000537047 CHRNA2Q15822 529 aa8.5□□□□□ -1.05
CCDC7-208ENST00000537047 HNRNPLLQ8WVV9 542 aaKnown RBP8.5□□□□□ -1.05
CCDC7-208ENST00000537047 PTPN18Q99952 460 aa8.5□□□□□ -1.05
CCDC7-208ENST00000537047 IER2Q9BTL4 223 aa8.5□□□□□ -1.05
CCDC7-208ENST00000537047 EPB41L1Q9H4G0 881 aa8.5□□□□□ -1.05
CCDC7-208ENST00000537047 L2HGDHQ9H9P8 463 aa8.5□□□□□ -1.05
CCDC7-208ENST00000537047 NGRNQ9NPE2 291 aaKnown RBP8.5□□□□□ -1.05
CCDC7-208ENST00000537047 GRIN1Q05586 938 aa8.49□□□□□ -1.05
CCDC7-208ENST00000537047 ICAM4Q14773 271 aa8.49□□□□□ -1.05
CCDC7-208ENST00000537047 GLB1LQ6UWU2 654 aa8.49□□□□□ -1.05
CCDC7-208ENST00000537047 EEPD1Q7L9B9 569 aa8.49□□□□□ -1.05
CCDC7-208ENST00000537047 PIP4K2CQ8TBX8 421 aa8.49□□□□□ -1.05
CCDC7-208ENST00000537047 IGDCC4Q8TDY8 1250 aa8.49□□□□□ -1.05
CCDC7-208ENST00000537047 CLIC6Q96NY7 704 aa8.49□□□□□ -1.05
CCDC7-208ENST00000537047 C9orf118A6NHY6 69 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 SLC27A2O14975 620 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 LAMTOR5O43504 91 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 DLX3O60479 287 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 PROSER1Q86XN7 944 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 MCF2L2Q86YR7 1114 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms