RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 EIF4E1BA6NMX2 242 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 CFLARO15519 480 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 MAFGO15525 162 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 DDIT3P35638 169 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 NSFP46459 744 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 GUCY2DQ02846 1103 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 MARCH10Q8NA82 808 aaPredicted RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 KLHL14Q9P2G3 628 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 MYOM2P54296 1465 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 PLEKHG3A1L390 1219 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 NR2F2P24468 414 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 NOP14P78316 857 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 POTEDQ86YR6 584 aa13.72□□□□□ -0.21
SPG11-203ENST00000535302 NXF1Q9UBU9 619 aaKnown RBP13.72□□□□□ -0.21
SPG11-203ENST00000535302 C2orf54Q08AI8 447 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 CYP4F22Q6NT55 531 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 POLD4Q9HCU8 107 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 METP08581 1390 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 SETD1BQ9UPS6 1966 aaKnown RBP13.71□□□□□ -0.21
SPG11-203ENST00000535302 FMNL1O95466 1100 aaPredicted RBP13.71□□□□□ -0.21
SPG11-203ENST00000535302 TTLL1O95922 423 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 RSRC2Q7L4I2 434 aaKnown RBP13.71□□□□□ -0.21
SPG11-203ENST00000535302 FAM149B1Q96BN6 582 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 VCX3AQ9NNX9 186 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 KMT5AQ9NQR1 393 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 SHANK2Q9UPX8 1470 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 ABI1Q8IZP0 508 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 HIPK4Q8NE63 616 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 LARP4BQ92615 738 aaKnown RBP13.71□□□□□ -0.21
SPG11-203ENST00000535302 PLEKHF1Q96S99 279 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 RASIP1Q5U651 963 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 TUBGCP2Q9BSJ2 902 aa13.71□□□□□ -0.21
SPG11-203ENST00000535302 TFAMQ00059 246 aaKnown RBP13.71□□□□□ -0.22
SPG11-203ENST00000535302 NSUN2Q08J23 767 aaKnown RBP eCLIP13.71□□□□□ -0.22
SPG11-203ENST00000535302 CTTNQ14247 550 aaKnown RBP13.71□□□□□ -0.22
SPG11-203ENST00000535302 TMED2Q15363 201 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 PPP2R5EQ16537 467 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 TMEM94Q12767 1356 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 TOM1L1O75674 476 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 LARGE1O95461 756 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 NCF2P19878 526 aaPredicted RBP13.71□□□□□ -0.22
SPG11-203ENST00000535302 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.22
SPG11-203ENST00000535302 ARHGAP4P98171 946 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 PDE1BQ01064 536 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 TMED1Q13445 227 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 DPCR1Q3MIW9 517 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 UBE2Q2Q8WVN8 375 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 AMNQ9BXJ7 453 aa13.71□□□□□ -0.22
SPG11-203ENST00000535302 ZMYM1Q5SVZ6 1142 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 SPATA1Q5VX52 437 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 MAIP1Q8WWC4 291 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 IWS1Q96ST2 819 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 FAM8A1Q9UBU6 413 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 CDO1Q16878 200 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 DNAAF3Q8N9W5 541 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 WDR48Q8TAF3 677 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 LRRC8CQ8TDW0 803 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 CNKSR1Q969H4 720 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 SCHIP1Q9P0W5 487 aaPredicted RBP13.7□□□□□ -0.22
SPG11-203ENST00000535302 SUGT1Q9Y2Z0 365 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 PCDHA5Q9Y5H7 936 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 GFPT2O94808 682 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 MOCS3O95396 460 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 PRPSAP1Q14558 356 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 APOA5Q6Q788 366 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 LONP1P36776 959 aaKnown RBP13.7□□□□□ -0.22
SPG11-203ENST00000535302 SCYL3Q8IZE3 742 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 CEP170P1Q96L14 293 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 PIH1D3Q9NQM4 214 aaKnown RBP13.7□□□□□ -0.22
SPG11-203ENST00000535302 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 FTCDO95954 541 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 WHAMMP3Q1A5X7 153 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 KRT27Q7Z3Y8 459 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 OSBP2Q969R2 916 aa13.7□□□□□ -0.22
SPG11-203ENST00000535302 SNAP23O00161 211 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 RSBN1LQ6PCB5 846 aaPredicted RBP13.69□□□□□ -0.22
SPG11-203ENST00000535302 SLC35F6Q8N357 371 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 CPVLQ9H3G5 476 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 GPC4O75487 556 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 SRGAP2CP0DJJ0 459 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 MECOMQ03112 1051 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 GRK7Q8WTQ7 553 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 LARSQ9P2J5 1176 aaKnown RBP13.69□□□□□ -0.22
SPG11-203ENST00000535302 SUCLA2Q9P2R7 463 aaPredicted RBP13.69□□□□□ -0.22
SPG11-203ENST00000535302 ZNF215Q9UL58 517 aaPredicted RBP13.69□□□□□ -0.22
SPG11-203ENST00000535302 PPP1R9AQ9ULJ8 1098 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
SPG11-203ENST00000535302 FAM196BA6NMK8 535 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 ADD2P35612 726 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 SOX5P35711 763 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 CYTH2Q99418 400 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 SLC38A10Q9HBR0 1119 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 INHBAP08476 426 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 CCT5P48643 541 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 P3H4Q92791 437 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 HPS4Q9NQG7 708 aa13.69□□□□□ -0.22
SPG11-203ENST00000535302 SSTR3P32745 418 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms