RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 C16orf59Q7L2K0 433 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 C7orf31Q8N865 590 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 KAT2BQ92831 832 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 PSTPIP2Q9H939 334 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
CSDE1-217ENST00000534699 NFASCO94856 1347 aa11.95□□□□□ -0.5
CSDE1-217ENST00000534699 MEIS2O14770 477 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 ZBTB43O43298 467 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 POU3F3P20264 500 aaPredicted RBP11.94□□□□□ -0.5
CSDE1-217ENST00000534699 EVCP57679 992 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 IRX6P78412 446 aaPredicted RBP11.94□□□□□ -0.5
CSDE1-217ENST00000534699 PTGISQ16647 500 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 LY6KQ17RY6 165 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 HOMER1Q86YM7 354 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 SRBD1Q8N5C6 995 aaKnown RBP11.94□□□□□ -0.5
CSDE1-217ENST00000534699 CHMP4CQ96CF2 233 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 TIFAQ96CG3 184 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 TRPV6Q9H1D0 765 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 WNT8AQ9H1J5 351 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 MLXIPQ9HAP2 919 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 RIC8AQ9NPQ8 531 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 NOD1Q9Y239 953 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 UBIAD1Q9Y5Z9 338 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 SLC4A7Q9Y6M7 1214 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 ABHD14A-ACY1A0A1B0GW23 586 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 CYP2C18P33260 490 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 PSMC6P62333 389 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 RTN1Q16799 776 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 CNKSR3Q6P9H4 555 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 RGS20O76081 388 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 GGPS1O95749 300 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 MYCLP12524 364 aaPredicted RBP11.94□□□□□ -0.5
CSDE1-217ENST00000534699 UBA1P22314 1058 aaKnown RBP11.94□□□□□ -0.5
CSDE1-217ENST00000534699 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 SPATA33Q96N06 139 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 GUCD1Q96NT3 240 aa11.94□□□□□ -0.5
CSDE1-217ENST00000534699 TRIOBPQ9H2D6 2365 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 SPDYE3A6NKU9 549 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 DNAJB2P25686 324 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 FAM26DQ5JW98 314 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 COPS5Q92905 334 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 C22orf23Q9BZE7 217 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 PPP1R12CQ9BZL4 782 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 SENP2Q9HC62 589 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 JADE2Q9NQC1 790 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 SH3GLB2Q9NR46 395 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 SQORQ9Y6N5 450 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 CNTNAP5Q8WYK1 1306 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 KIF28PB7ZC32 967 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 SLC26A2P50443 739 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
CSDE1-217ENST00000534699 FAM47CQ5HY64 1035 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 BICD2Q8TD16 824 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 APBB2Q92870 758 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 TAF6LQ9Y6J9 622 aa11.93□□□□□ -0.5
CSDE1-217ENST00000534699 GBF1Q92538 1859 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 MRPS9P82933 396 aaKnown RBP11.92□□□□□ -0.5
CSDE1-217ENST00000534699 BLOC1S2Q6QNY1 142 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 LRRC8DQ7L1W4 858 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 SERINC5Q86VE9 423 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 C16orf70Q9BSU1 422 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
CSDE1-217ENST00000534699 LMCD1Q9NZU5 365 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 C17orf102A2RUQ5 167 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 NOP56O00567 594 aaKnown RBP11.92□□□□□ -0.5
CSDE1-217ENST00000534699 CYP3A4P08684 503 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 FUT2Q10981 343 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 TRIM71Q2Q1W2 868 aaKnown RBP11.92□□□□□ -0.5
CSDE1-217ENST00000534699 SAMD11Q96NU1 681 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 GAS2L1Q99501 681 aaPredicted RBP11.92□□□□□ -0.5
CSDE1-217ENST00000534699 CDX2Q99626 313 aaPredicted RBP11.92□□□□□ -0.5
CSDE1-217ENST00000534699 ZNF576Q9H609 170 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 BARHL2Q9NY43 387 aa11.92□□□□□ -0.5
CSDE1-217ENST00000534699 RRN3P2A6NIE6 340 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 PRPF3O43395 683 aaKnown RBP11.91□□□□□ -0.5
CSDE1-217ENST00000534699 KIAA0753Q2KHM9 967 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 TMEM63BQ5T3F8 832 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 TAF2Q6P1X5 1199 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 CHST3Q7LGC8 479 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 FCHSD1Q86WN1 690 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 SEPT1Q8WYJ6 367 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 NRCAMQ92823 1304 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 GPR20Q99678 358 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 TRMT13Q9NUP7 481 aaKnown RBP11.91□□□□□ -0.5
CSDE1-217ENST00000534699 CEP290O15078 2479 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 GOLGA8AA7E2F4 631 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 GOLGA8BA8MQT2 603 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 H3BRB1 525 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 LGR5O75473 907 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 PLEKHA8P1O95397 391 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 LGALS2P05162 132 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 GNA11P29992 359 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 HOXA13P31271 388 aaPredicted RBP11.91□□□□□ -0.5
CSDE1-217ENST00000534699 ADCY7P51828 1080 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 GALNT17Q6IS24 598 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 GDF6Q6KF10 455 aaPredicted RBP11.91□□□□□ -0.5
CSDE1-217ENST00000534699 CCDC148Q8NFR7 591 aa11.91□□□□□ -0.5
CSDE1-217ENST00000534699 SYMPKQ92797 1274 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms