RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 FAM209AQ5JX71 171 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 ZNF648Q5T619 568 aaPredicted RBP5.33□□□□□ -1.56
HIPK3-206ENST00000534262 RPTNQ6XPR3 784 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 CCAR1Q8IX12 1150 aaKnown RBP5.33□□□□□ -1.56
HIPK3-206ENST00000534262 Q8N1Y9 231 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 DCAF4Q8WV16 495 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 CEP89Q96ST8 783 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 DHRS4Q9BTZ2 278 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 ASPSCR1Q9BZE9 553 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 CDIP1Q9H305 208 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 FBXL7Q9UJT9 491 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 X6R8D5 127 aa5.33□□□□□ -1.56
HIPK3-206ENST00000534262 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 BLACEA4D250 179 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 PLD2O14939 933 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 KIF3BO15066 747 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 C6orf222P0C671 652 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-206ENST00000534262 POU3F2P20265 443 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-206ENST00000534262 MAPKAPK2P49137 400 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 RPL11P62913 178 aaKnown RBP5.32□□□□□ -1.56
HIPK3-206ENST00000534262 SRSF3P84103 164 aaKnown RBP5.32□□□□□ -1.56
HIPK3-206ENST00000534262 LSAMPQ13449 338 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 FNDC3BQ53EP0 1204 aaKnown RBP5.32□□□□□ -1.56
HIPK3-206ENST00000534262 STYK1Q6J9G0 422 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 KCNT2Q6UVM3 1135 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 USP53Q70EK8 1073 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 CEP68Q76N32 757 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 NLRP10Q86W26 655 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 TEX2Q8IWB9 1127 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 NETO2Q8NC67 525 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 BHLHE22Q8NFJ8 381 aaPredicted RBP5.32□□□□□ -1.56
HIPK3-206ENST00000534262 KCNN1Q92952 543 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 CLUHP3Q96NS8 147 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 CDC6Q99741 560 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 GCM1Q9NP62 436 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 INTS7Q9NVH2 962 aaKnown RBP5.32□□□□□ -1.56
HIPK3-206ENST00000534262 MARCH2Q9P0N8 246 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 PCDHA2Q9Y5H9 948 aa5.32□□□□□ -1.56
HIPK3-206ENST00000534262 ASXL2Q76L83 1435 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 PHLDB1Q86UU1 1377 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 ZC3H12DA2A288 527 aaKnown RBP5.31□□□□□ -1.56
HIPK3-206ENST00000534262 NUDT19A8MXV4 375 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 C22orf46C9J442 243 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 IRS4O14654 1257 aaPredicted RBP5.31□□□□□ -1.56
HIPK3-206ENST00000534262 NTRK1P04629 796 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 MED14OSP0DP75 135 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 SOX5P35711 763 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 TMEM62Q0P6H9 643 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 C21orf62-AS1Q17RA5 79 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 SYDE1Q6ZW31 735 aaPredicted RBP5.31□□□□□ -1.56
HIPK3-206ENST00000534262 RIOX2Q8IUF8 465 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 ZFYVE21Q9BQ24 234 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 PHF20Q9BVI0 1012 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 PCGF6Q9BYE7 350 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 PRDM16Q9HAZ2 1276 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 MBD1Q9UIS9 605 aaPredicted RBP5.31□□□□□ -1.56
HIPK3-206ENST00000534262 HCFC2Q9Y5Z7 792 aa5.31□□□□□ -1.56
HIPK3-206ENST00000534262 IRS2Q9Y4H2 1338 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 F8W031 263 aaPredicted RBP5.3□□□□□ -1.56
HIPK3-206ENST00000534262 H7BY64 318 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 ETV2O00321 342 aaPredicted RBP5.3□□□□□ -1.56
HIPK3-206ENST00000534262 MYO1BO43795 1136 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 SEMA7AO75326 666 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 C8AP07357 584 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 GLDCP23378 1020 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 SUMO1P63165 101 aaKnown RBP5.3□□□□□ -1.56
HIPK3-206ENST00000534262 PRR5P85299 388 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 NFKB2Q00653 900 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 PLEKHN1Q494U1 663 aaPredicted RBP5.3□□□□□ -1.56
HIPK3-206ENST00000534262 TRIM61Q5EBN2 209 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 MROH9Q5TGP6 573 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 WWC2Q6AWC2 1192 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 ZC3H14Q6PJT7 736 aaKnown RBP5.3□□□□□ -1.56
HIPK3-206ENST00000534262 LBX2Q6XYB7 198 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 USP33Q8TEY7 942 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 PTPRN2Q92932 1015 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 EVI5LQ96CN4 794 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 TMEM169Q96HH4 297 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 TARS2Q9BW92 718 aaKnown RBP5.3□□□□□ -1.56
HIPK3-206ENST00000534262 SGPP1Q9BX95 441 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 MRPL4Q9BYD3 311 aaKnown RBP5.3□□□□□ -1.56
HIPK3-206ENST00000534262 CNTD2Q9H8S5 307 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 RXFP1Q9HBX9 757 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 MCM8Q9UJA3 840 aa5.3□□□□□ -1.56
HIPK3-206ENST00000534262 MRPS23Q9Y3D9 190 aaKnown RBP5.3□□□□□ -1.56
HIPK3-206ENST00000534262 FPR2P25090 351 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 GPR85P60893 370 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 DLG4P78352 724 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 LRRC41Q15345 812 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 OLFML2BQ68BL8 750 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 NECAB2Q7Z6G3 386 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 STRA8Q7Z7C7 330 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 CABP7Q86V35 215 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 LDHDQ86WU2 507 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 TSPAN17Q96FV3 270 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 TRMT2BQ96GJ1 504 aaKnown RBP5.29□□□□□ -1.56
HIPK3-206ENST00000534262 IPO9Q96P70 1041 aaKnown RBP5.29□□□□□ -1.56
HIPK3-206ENST00000534262 CAMKK2Q96RR4 588 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 RPS6KC1Q96S38 1066 aa5.29□□□□□ -1.56
HIPK3-206ENST00000534262 SLC38A3Q99624 504 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms