RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 NTRK3Q16288 839 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 BRDTQ58F21 947 aaPredicted RBP12.48□□□□□ -0.41
SDHD-208ENST00000534010 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 CRYGNQ8WXF5 182 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 HERVK_113Q902F9 699 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 C16orf70Q9BSU1 422 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 HIPK3Q9H422 1215 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 IL23AQ9NPF7 189 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 XIRP2A4UGR9 3374 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 WDR81Q562E7 1941 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 hCG_1984214I3L0E3 225 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 MYL3P08590 195 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 SUPT20HL2P0C7V6 817 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 CPA1P15085 419 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 RPS6KB1P23443 525 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 HIC1Q14526 733 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 DGKDQ16760 1214 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 TRIM71Q2Q1W2 868 aaKnown RBP12.47□□□□□ -0.41
SDHD-208ENST00000534010 WWC2Q6AWC2 1192 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 TRAF7Q6Q0C0 670 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 NFXL1Q6ZNB6 911 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 Q7L0L9 218 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 TMEM199Q8N511 208 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 ZNF713Q8N859 430 aaPredicted RBP12.47□□□□□ -0.41
SDHD-208ENST00000534010 DHX38Q92620 1227 aaKnown RBP12.47□□□□□ -0.41
SDHD-208ENST00000534010 GUCD1Q96NT3 240 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 TTYH1Q9H313 450 aaPredicted RBP12.47□□□□□ -0.41
SDHD-208ENST00000534010 PPP4R2Q9NY27 417 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 GTF2IRD1Q9UHL9 959 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 UBIAD1Q9Y5Z9 338 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
SDHD-208ENST00000534010 STXBP3O00186 592 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 ZBTB43O43298 467 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 REC8O95072 547 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 GGPS1O95749 300 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 ITGB5P18084 799 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 CASTP20810 708 aaKnown RBP12.46□□□□□ -0.41
SDHD-208ENST00000534010 ADAM17P78536 824 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 PKN1Q16512 942 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 GDF6Q6KF10 455 aaPredicted RBP12.46□□□□□ -0.41
SDHD-208ENST00000534010 PSRC1Q6PGN9 363 aaPredicted RBP12.46□□□□□ -0.41
SDHD-208ENST00000534010 METTL7BQ6UX53 244 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 FCHSD1Q86WN1 690 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 RAB11FIP4Q86YS3 637 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 DEFB123Q8N688 67 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 VTI1AQ96AJ9 217 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 PPP1R12CQ9BZL4 782 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 PSTPIP2Q9H939 334 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 BARHL2Q9NY43 387 aa12.46□□□□□ -0.41
SDHD-208ENST00000534010 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
SDHD-208ENST00000534010 SIP14410 1827 aa12.46□□□□□ -0.42
SDHD-208ENST00000534010 KLF18A0A0U1RQI7 1052 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 hCG_1642624A0A1W2PR95 340 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 FIBPO43427 364 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 CYP2C9P11712 490 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 MYCLP12524 364 aaPredicted RBP12.45□□□□□ -0.42
SDHD-208ENST00000534010 KCNA2P16389 499 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 ADD1P35611 737 aaKnown RBP12.45□□□□□ -0.42
SDHD-208ENST00000534010 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
SDHD-208ENST00000534010 TOB2Q14106 344 aaPredicted RBP12.45□□□□□ -0.42
SDHD-208ENST00000534010 RTN1Q16799 776 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 Q6ZUG5 572 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 ZNF365Q70YC5 407 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 DHX37Q8IY37 1157 aaKnown RBP12.45□□□□□ -0.42
SDHD-208ENST00000534010 GPRASP2Q96D09 838 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
SDHD-208ENST00000534010 RIC8AQ9NPQ8 531 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 CXXC1Q9P0U4 656 aaPredicted RBP12.45□□□□□ -0.42
SDHD-208ENST00000534010 STXBP5LQ9Y2K9 1186 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 TELO2Q9Y4R8 837 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 KAT6AQ92794 2004 aa12.45□□□□□ -0.42
SDHD-208ENST00000534010 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.44□□□□□ -0.42
SDHD-208ENST00000534010 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.44□□□□□ -0.42
SDHD-208ENST00000534010 ATP9AO75110 1047 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 CXCL10P02778 98 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 PFKMP08237 780 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 PSEN2P49810 448 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 NEDD9Q14511 834 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 PFKFB3Q16875 520 aaPredicted RBP12.44□□□□□ -0.42
SDHD-208ENST00000534010 GNPTABQ3T906 1256 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 BLOC1S2Q6QNY1 142 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 PIBF1Q8WXW3 757 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 WNT8BQ93098 351 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
SDHD-208ENST00000534010 JAKMIP1Q96N16 626 aaKnown RBP12.44□□□□□ -0.42
SDHD-208ENST00000534010 GPR20Q99678 358 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 KATNAL1Q9BW62 490 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 SEMA6BQ9H3T3 888 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 HDAC6Q9UBN7 1215 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 MICAL3Q7RTP6 2002 aa12.44□□□□□ -0.42
SDHD-208ENST00000534010 TTC28Q96AY4 2481 aa12.43□□□□□ -0.42
SDHD-208ENST00000534010 GOLGA8AA7E2F4 631 aa12.43□□□□□ -0.42
SDHD-208ENST00000534010 GOLGA8BA8MQT2 603 aa12.43□□□□□ -0.42
SDHD-208ENST00000534010 ADAMTS3O15072 1205 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms