RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 SCARA3Q6AZY7 606 aa5.34□□□□□ -1.55
USP33-218ENST00000533928 C16orf71Q8IYS4 520 aaPredicted RBP5.34□□□□□ -1.55
USP33-218ENST00000533928 TRMT2AQ8IZ69 625 aaKnown RBP5.34□□□□□ -1.55
USP33-218ENST00000533928 C8orf58Q8NAV2 365 aa5.34□□□□□ -1.55
USP33-218ENST00000533928 ZNF507Q8TCN5 953 aa5.34□□□□□ -1.55
USP33-218ENST00000533928 ARHGAP45Q92619 1136 aa5.34□□□□□ -1.55
USP33-218ENST00000533928 TRAIPQ9BWF2 469 aa5.34□□□□□ -1.55
USP33-218ENST00000533928 FOXQ1Q9C009 403 aa5.34□□□□□ -1.55
USP33-218ENST00000533928 CARS2Q9HA77 564 aaKnown RBP5.34□□□□□ -1.55
USP33-218ENST00000533928 TTF2Q9UNY4 1162 aaKnown RBP5.34□□□□□ -1.55
USP33-218ENST00000533928 MAPK8IP1Q9UQF2 711 aa5.34□□□□□ -1.55
USP33-218ENST00000533928 ARAP2Q8WZ64 1704 aa5.34□□□□□ -1.56
USP33-218ENST00000533928 MED23Q9ULK4 1368 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 TRPM7Q96QT4 1865 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 XDHP47989 1333 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 ZBED9Q6R2W3 1325 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 PI4KAP2A4QPH2 592 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 FAM155AB1AL88 458 aaPredicted RBP5.33□□□□□ -1.56
USP33-218ENST00000533928 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.33□□□□□ -1.56
USP33-218ENST00000533928 LRIG2O94898 1065 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 SLITRK5O94991 958 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 HSPA6P17066 643 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 PIP4K2AP48426 406 aaPredicted RBP5.33□□□□□ -1.56
USP33-218ENST00000533928 CTSWP56202 376 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 EIF6P56537 245 aaKnown RBP5.33□□□□□ -1.56
USP33-218ENST00000533928 PTPN11Q06124 597 aaPredicted RBP5.33□□□□□ -1.56
USP33-218ENST00000533928 SLFN5Q08AF3 891 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 AIMP1Q12904 312 aaKnown RBP5.33□□□□□ -1.56
USP33-218ENST00000533928 GCKRQ14397 625 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 INPP5AQ14642 412 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 TNIP1Q15025 636 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 CCDC184Q52MB2 194 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 CDKAL1Q5VV42 579 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 LRFN4Q6PJG9 635 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 DPP8Q6V1X1 898 aaPredicted RBP5.33□□□□□ -1.56
USP33-218ENST00000533928 C15orf52Q6ZUT6 534 aaKnown RBP5.33□□□□□ -1.56
USP33-218ENST00000533928 CYFIP1Q7L576 1253 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 LDHDQ86WU2 507 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 NIM1KQ8IY84 436 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 PI4KAP1Q8N8J0 262 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 GAL3ST3Q96A11 431 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 HSPA12BQ96MM6 686 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 SEMA3GQ9NS98 782 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 MAP3K2Q9Y2U5 619 aa5.33□□□□□ -1.56
USP33-218ENST00000533928 COL1A1P02452 1464 aaPredicted RBP5.32□□□□□ -1.56
USP33-218ENST00000533928 PRR33A8MZF0 331 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 GRM8O00222 908 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 IGKV5-2P06315 115 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 CSF1RP07333 972 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 GLI1P08151 1106 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 EIF4BP23588 611 aaKnown RBP5.32□□□□□ -1.56
USP33-218ENST00000533928 GNA15P30679 374 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 RPS8P62241 208 aaKnown RBP5.32□□□□□ -1.56
USP33-218ENST00000533928 KRT24Q2M2I5 525 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 TMEM67Q5HYA8 995 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 MPZL3Q6UWV2 235 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.32□□□□□ -1.56
USP33-218ENST00000533928 PRR23BQ6ZRT6 265 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 USP50Q70EL3 339 aaPredicted RBP5.32□□□□□ -1.56
USP33-218ENST00000533928 SV2BQ7L1I2 683 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 CILP2Q8IUL8 1156 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 NPAS4Q8IUM7 802 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 ANKRD18AQ8IVF6 992 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 FAM9BQ8IZU0 186 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 TSPYL6Q8N831 410 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 DPF2Q92785 391 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 TSR2Q969E8 191 aaKnown RBP5.32□□□□□ -1.56
USP33-218ENST00000533928 PLPPR2Q96GM1 343 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 KIRREL1Q96J84 757 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 MYD88Q99836 296 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 API5Q9BZZ5 524 aaKnown RBP5.32□□□□□ -1.56
USP33-218ENST00000533928 ANKRD2Q9GZV1 360 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 ATP13A1Q9HD20 1204 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 ZNRF3Q9ULT6 936 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 TPX2Q9ULW0 747 aaKnown RBP5.32□□□□□ -1.56
USP33-218ENST00000533928 ECM29Q5VYK3 1845 aa5.32□□□□□ -1.56
USP33-218ENST00000533928 THSD7BQ9C0I4 1608 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 PATL2C9JE40 543 aaKnown RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 IPO8O15397 1037 aaKnown RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 ANXA1P04083 346 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 CFPP27918 469 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 IGHMBP2P38935 993 aaKnown RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 CCT4P50991 539 aaKnown RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 CASP7P55210 303 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 FKBP1AP62942 108 aaKnown RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 EXOSC9Q06265 439 aaKnown RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 SLBPQ14493 270 aaKnown RBP eCLIP5.31□□□□□ -1.56
USP33-218ENST00000533928 RABL6Q3YEC7 729 aaPredicted RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 SFRP5Q5T4F7 317 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 BEND3Q5T5X7 828 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 DIEXFQ68CQ4 756 aaKnown RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 TTBK2Q6IQ55 1244 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 SYDE1Q6ZW31 735 aaPredicted RBP5.31□□□□□ -1.56
USP33-218ENST00000533928 HDXQ7Z353 690 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 SYNE4Q8N205 404 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 AGBL3Q8NEM8 1001 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 TTLL11Q8NHH1 800 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 FAM89AQ96GI7 184 aa5.31□□□□□ -1.56
USP33-218ENST00000533928 HHIPL1Q96JK4 782 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms