RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 PCDHA2Q9Y5H9 948 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 PCDHA13Q9Y5I0 950 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 LRRC53A6NM62 1247 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 ZNF185O15231 689 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 ERCC3P19447 782 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 KIF11P52732 1056 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 SPA17Q15506 151 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 SMCR8Q8TEV9 937 aaPredicted RBP22.6■■□□□ 1.21
SMIM3-201ENST00000526627 SECISBP2LQ93073 1101 aaKnown RBP22.6■■□□□ 1.21
SMIM3-201ENST00000526627 CCDC17Q96LX7 622 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 UIMC1Q96RL1 719 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 PCDHAC2Q9Y5I4 1007 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 CRKP46108 304 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 GYS2P54840 703 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 CASP8Q14790 479 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 FAM26FQ5R3K3 315 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 TSG101Q99816 390 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 SH2D4AQ9H788 454 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 KCNMB3Q9NPA1 279 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 KCNQ5Q9NR82 932 aa22.6■■□□□ 1.21
SMIM3-201ENST00000526627 TRPC5Q9UL62 973 aaPredicted RBP22.6■■□□□ 1.21
SMIM3-201ENST00000526627 FAM196BA6NMK8 535 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 E9PMD0 336 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 NPR1P16066 1061 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 RRAGAQ7L523 313 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 MBOAT7Q96N66 472 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 CAPN6Q9Y6Q1 641 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 KDM3AQ9Y4C1 1321 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 TRIM37O94972 964 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 CKAP4Q07065 602 aaKnown RBP22.59■■□□□ 1.21
SMIM3-201ENST00000526627 ASTE1Q2TB18 679 aaPredicted RBP22.59■■□□□ 1.21
SMIM3-201ENST00000526627 PDXDC1Q6P996 788 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 MKL1Q969V6 931 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 IFIH1Q9BYX4 1025 aaKnown RBP22.59■■□□□ 1.21
SMIM3-201ENST00000526627 MLXIPQ9HAP2 919 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 KIAA1024Q9UPX6 916 aa22.59■■□□□ 1.21
SMIM3-201ENST00000526627 CYP3A7-CYP3A51PA0A087WV96 503 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 MARCH6O60337 910 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 EEF2P13639 858 aaKnown RBP22.58■■□□□ 1.21
SMIM3-201ENST00000526627 CYP3A7P24462 503 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 FKBP3Q00688 224 aaKnown RBP22.58■■□□□ 1.21
SMIM3-201ENST00000526627 SIAH1Q8IUQ4 282 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 GPIHBP1Q8IV16 184 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 RPGRIP1Q96KN7 1286 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 ZDHHC15Q96MV8 337 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 P2RX7Q99572 595 aaKnown RBP22.58■■□□□ 1.21
SMIM3-201ENST00000526627 NAP1L4Q99733 375 aaKnown RBP22.58■■□□□ 1.21
SMIM3-201ENST00000526627 NT5C3AQ9H0P0 336 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 RNF216Q9NWF9 866 aaPredicted RBP22.58■■□□□ 1.21
SMIM3-201ENST00000526627 COL4A3BPQ9Y5P4 624 aa22.58■■□□□ 1.21
SMIM3-201ENST00000526627 POTEB3A0JP26 581 aa22.58■■□□□ 1.2
SMIM3-201ENST00000526627 LRRIQ3A6PVS8 624 aaPredicted RBP22.58■■□□□ 1.2
SMIM3-201ENST00000526627 POTECB2RU33 542 aa22.58■■□□□ 1.2
SMIM3-201ENST00000526627 N4BP1O75113 896 aaKnown RBP22.58■■□□□ 1.2
SMIM3-201ENST00000526627 PLA2G4BP0C869 781 aa22.58■■□□□ 1.2
SMIM3-201ENST00000526627 CACNB3P54284 484 aa22.58■■□□□ 1.2
SMIM3-201ENST00000526627 POTEBQ6S5H4 581 aa22.58■■□□□ 1.2
SMIM3-201ENST00000526627 ANO3Q9BYT9 981 aa22.58■■□□□ 1.2
SMIM3-201ENST00000526627 EDEM3Q9BZQ6 932 aa22.58■■□□□ 1.2
SMIM3-201ENST00000526627 PCDHA1Q9Y5I3 950 aa22.58■■□□□ 1.2
SMIM3-201ENST00000526627 COL11A2P13942 1736 aaPredicted RBP22.58■■□□□ 1.2
SMIM3-201ENST00000526627 NPHP3-ACAD11A0A0J9YXS1 232 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 USP11P51784 963 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 CRYGNQ8WXF5 182 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 TBC1D7Q9P0N9 293 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 DDTLA6NHG4 134 aaPredicted RBP22.57■■□□□ 1.2
SMIM3-201ENST00000526627 MEIS2O14770 477 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 USO1O60763 962 aaKnown RBP22.57■■□□□ 1.2
SMIM3-201ENST00000526627 NOL4O94818 638 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 SSBP05455 408 aaKnown RBP eCLIP22.57■■□□□ 1.2
SMIM3-201ENST00000526627 CDC37Q16543 378 aaPredicted RBP22.57■■□□□ 1.2
SMIM3-201ENST00000526627 HGSNATQ68CP4 663 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 SH3BP5LQ7L8J4 393 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 TRIM58Q8NG06 486 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 DCAF4Q8WV16 495 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 NYAP2Q9P242 653 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 FAM198AQ9UFP1 575 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 SNX12Q9UMY4 172 aa22.57■■□□□ 1.2
SMIM3-201ENST00000526627 TARSL2A2RTX5 802 aaKnown RBP22.56■■□□□ 1.2
SMIM3-201ENST00000526627 TRAF5O00463 557 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 CYP11B2P19099 503 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 TCP10Q12799 353 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 SLFN13Q68D06 897 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 GLT8D2Q9H1C3 349 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 ADAM21Q9UKJ8 722 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 JRKLQ9Y4A0 524 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 MED24O75448 989 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 MOCS3O95396 460 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 STAT3P40763 770 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 SLC1A4P43007 532 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 MAPK8IP2Q13387 824 aaPredicted RBP22.56■■□□□ 1.2
SMIM3-201ENST00000526627 CREG2Q8IUH2 290 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 NEK11Q8NG66 645 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 SCFD1Q8WVM8 642 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 ZBTB9Q96C00 473 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 CEP63Q96MT8 703 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 KCTD10Q9H3F6 313 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 DBNDD1Q9H9R9 158 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 SALL4Q9UJQ4 1053 aa22.56■■□□□ 1.2
SMIM3-201ENST00000526627 PJA2O43164 708 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms