RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 RSPH10B2B2RC85 870 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 RNF225M0QZC1 329 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-216ENST00000524481 RSPH10BP0C881 870 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 ARP10275 920 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 PRELPP51888 382 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 EAPPQ56P03 285 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-216ENST00000524481 KIF18AQ8NI77 898 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 CTAGE1Q96RT6 745 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 SLF1Q9BQI6 1058 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 ZNF577Q9BSK1 485 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 EML1O00423 815 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 CLIC2O15247 247 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 NOVP48745 357 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
PTPRK-216ENST00000524481 SYCP1Q15431 976 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 KIAA0895Q8NCT3 520 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 SMCR8Q8TEV9 937 aaPredicted RBP13.09□□□□□ -0.31
PTPRK-216ENST00000524481 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
PTPRK-216ENST00000524481 MYH15Q9Y2K3 1946 aa13.08□□□□□ -0.31
PTPRK-216ENST00000524481 PRPF6O94906 941 aaKnown RBP13.08□□□□□ -0.32
PTPRK-216ENST00000524481 PPP4R3AQ6IN85 833 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 TC2NQ8N9U0 490 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 GMCL1P1Q8NEA9 526 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 ERMNQ8TAM6 284 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 NLRC4Q9NPP4 1024 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 SPTLC3Q9NUV7 552 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 RNF181Q9P0P0 153 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 MRPL11Q9Y3B7 192 aaKnown RBP13.08□□□□□ -0.32
PTPRK-216ENST00000524481 FAM26FQ5R3K3 315 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 MOB2Q70IA6 237 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 EEPD1Q7L9B9 569 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 GIMAP8Q8ND71 665 aaPredicted RBP13.08□□□□□ -0.32
PTPRK-216ENST00000524481 ACRBPQ8NEB7 543 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 ATG4CQ96DT6 458 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 DYDC2Q96IM9 177 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 FHDC1Q9C0D6 1143 aaPredicted RBP13.08□□□□□ -0.32
PTPRK-216ENST00000524481 TMEM150BA6NC51 233 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 OPLAHO14841 1288 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 PRPF38AQ8NAV1 312 aaKnown RBP13.08□□□□□ -0.32
PTPRK-216ENST00000524481 CHP1Q99653 195 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 WDR11Q9BZH6 1224 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 ZMYND15Q9H091 742 aa13.08□□□□□ -0.32
PTPRK-216ENST00000524481 MRPL44Q9H9J2 332 aaKnown RBP13.08□□□□□ -0.32
PTPRK-216ENST00000524481 ECM29Q5VYK3 1845 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 A0A1B0GTH6 734 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 GCNT3O95395 438 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 DNA2P51530 1060 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 MUM1L1Q5H9M0 696 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 UTP14CQ5TAP6 766 aaKnown RBP13.07□□□□□ -0.32
PTPRK-216ENST00000524481 MYCT1Q8N699 235 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 SEMA6BQ9H3T3 888 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 PLIN4Q96Q06 1357 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 CLK2P49760 499 aaKnown RBP13.07□□□□□ -0.32
PTPRK-216ENST00000524481 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.323e-7■□□□□ 8.5
PTPRK-216ENST00000524481 USP11P51784 963 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 PDIA5Q14554 519 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 ARHGAP29Q52LW3 1261 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 CCDC65Q8IXS2 484 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 PAGR1Q9BTK6 254 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
PTPRK-216ENST00000524481 LUC7L2Q9Y383 392 aaKnown RBP13.07□□□□□ -0.32
PTPRK-216ENST00000524481 TBCAO75347 108 aaKnown RBP13.06□□□□□ -0.32
PTPRK-216ENST00000524481 FOSP01100 380 aaPredicted RBP13.06□□□□□ -0.32
PTPRK-216ENST00000524481 GCFC2P16383 781 aaKnown RBP13.06□□□□□ -0.32
PTPRK-216ENST00000524481 CCNE1P24864 410 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 APBA1Q02410 837 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 COASYQ13057 564 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
PTPRK-216ENST00000524481 SLFN12Q8IYM2 578 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 MYOCDQ8IZQ8 938 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 EIF2AK1Q9BQI3 630 aaKnown RBP13.06□□□□□ -0.32
PTPRK-216ENST00000524481 CLEC11AQ9Y240 323 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 PCDHB13Q9Y5F0 798 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 COL4A5P29400 1685 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 TTC26A0AVF1 554 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 SPAG1Q07617 926 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 GRIPAP1Q4V328 841 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 FKBP15Q5T1M5 1219 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 HAUS3Q68CZ6 603 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 PPP1R18Q6NYC8 613 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 FAM83AQ86UY5 434 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 IRF2BP1Q8IU81 584 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 IL31RAQ8NI17 732 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 TSG101Q99816 390 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 GLT8D2Q9H1C3 349 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 GUCA1BQ9UMX6 200 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 BICDL2A1A5D9 508 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 GYPCP04921 128 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 VCAM1P19320 739 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 NAP1L1P55209 391 aaKnown RBP13.06□□□□□ -0.32
PTPRK-216ENST00000524481 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 C7orf25Q9BPX7 421 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 NT5C3AQ9H0P0 336 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 RIPK3Q9Y572 518 aa13.06□□□□□ -0.32
PTPRK-216ENST00000524481 IPO5O00410 1097 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms