RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 GLT1D1Q96MS3 346 aa7.03□□□□□ -1.28
FAM49B-228ENST00000523993 SPC25Q9HBM1 224 aa7.03□□□□□ -1.28
FAM49B-228ENST00000523993 VTA1Q9NP79 307 aa7.03□□□□□ -1.28
FAM49B-228ENST00000523993 HOMER2Q9NSB8 354 aa7.03□□□□□ -1.28
FAM49B-228ENST00000523993 ADD3Q9UEY8 706 aaKnown RBP7.03□□□□□ -1.28
FAM49B-228ENST00000523993 ZHX1Q9UKY1 873 aaPredicted RBP7.03□□□□□ -1.28
FAM49B-228ENST00000523993 CCPG1Q9ULG6 757 aa7.03□□□□□ -1.28
FAM49B-228ENST00000523993 REV3LO60673 3130 aa7.03□□□□□ -1.28
FAM49B-228ENST00000523993 NEDD4P46934 1319 aa7.02□□□□□ -1.28
FAM49B-228ENST00000523993 SCN5AQ14524 2016 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 A0A0U1RQG5 324 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-228ENST00000523993 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-228ENST00000523993 TIMP1P01033 207 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 C6orf222P0C671 652 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-228ENST00000523993 SMPD1P17405 629 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 ALDH5A1P51649 535 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-228ENST00000523993 HAND2P61296 217 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 GHRHRQ02643 423 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 TNFAIP2Q03169 654 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 DPYDQ12882 1025 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 IKQ13123 557 aaPredicted RBP7.02□□□□□ -1.29
FAM49B-228ENST00000523993 DUSP28Q4G0W2 176 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 GNASQ5JWF2 1037 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 C9orf50Q5SZB4 431 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 RASIP1Q5U651 963 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 MFSD5Q6N075 450 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 IQCA1Q86XH1 822 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 PLPP7Q8NBV4 271 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 TET1Q8NFU7 2136 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 ZSWIM5Q9P217 1185 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 CTNNA3Q9UI47 895 aa7.02□□□□□ -1.29
FAM49B-228ENST00000523993 RAD50Q92878 1312 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 NFIBO00712 420 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 NKRFO15226 690 aaKnown RBP eCLIP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 ACTN4O43707 911 aaKnown RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 PQBP1O60828 265 aaKnown RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 RGS20O76081 388 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 RAG1P15918 1043 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 SLC16A2P36021 539 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 EPHB4P54760 987 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 FPGSQ05932 587 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 BAATQ14032 418 aaPredicted RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 FSCN1Q16658 493 aaKnown RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 CCDC96Q2M329 555 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 ASPRV1Q53RT3 343 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 RRP12Q5JTH9 1297 aaKnown RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 DMRTA1Q5VZB9 504 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 CCDC174Q6PII3 467 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 CWC27Q6UX04 472 aaKnown RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 RNF207Q6ZRF8 634 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 Q7L0L9 218 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 TLK2Q86UE8 772 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 NPAS4Q8IUM7 802 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 ENAHQ8N8S7 591 aaPredicted RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 MTMR8Q96EF0 704 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 GUCD1Q96NT3 240 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 ZSCAN10Q96SZ4 725 aaPredicted RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 USB1Q9BQ65 265 aaKnown RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 KRT23Q9C075 422 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 CNNM2Q9H8M5 875 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 PRDM5Q9NQX1 630 aaPredicted RBP7.01□□□□□ -1.29
FAM49B-228ENST00000523993 TOMM22Q9NS69 142 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 DIAPH3Q9NSV4 1193 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 TMEM39AQ9NV64 488 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 PCDHB9Q9Y5E1 797 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 NCOR1O75376 2440 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 KAT6AQ92794 2004 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 PTPRSQ13332 1948 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 GRIN2DO15399 1336 aa7.01□□□□□ -1.29
FAM49B-228ENST00000523993 XIRP2A4UGR9 3374 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 ANKRD33BA6NCL7 494 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 TK2O00142 265 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 ZEB2O60315 1214 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 GSPT1P15170 499 aaKnown RBP7□□□□□ -1.29
FAM49B-228ENST00000523993 CTHP32929 405 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 SNAP25P60880 206 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 RPS6P62753 249 aaKnown RBP7□□□□□ -1.29
FAM49B-228ENST00000523993 CLDN10P78369 228 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 SEC23AQ15436 765 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 IMMTQ16891 758 aaKnown RBP7□□□□□ -1.29
FAM49B-228ENST00000523993 SWI5Q1ZZU3 235 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 TTC22Q5TAA0 569 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 NSMFQ6X4W1 530 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 C16orf59Q7L2K0 433 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 FBXO16Q8IX29 292 aaPredicted RBP7□□□□□ -1.29
FAM49B-228ENST00000523993 SAMD3Q8N6K7 520 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 MPHOSPH6Q99547 160 aaKnown RBP7□□□□□ -1.29
FAM49B-228ENST00000523993 SLC4A5Q9BY07 1137 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 IRX2Q9BZI1 471 aaPredicted RBP7□□□□□ -1.29
FAM49B-228ENST00000523993 AP5M1Q9H0R1 490 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 IL25Q9H293 177 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 SEMA6BQ9H3T3 888 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 PDGFCQ9NRA1 345 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 MAP3K20Q9NYL2 800 aaKnown RBP7□□□□□ -1.29
FAM49B-228ENST00000523993 TNKSO95271 1327 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 ABCB11O95342 1321 aa7□□□□□ -1.29
FAM49B-228ENST00000523993 FRMPD2Q68DX3 1309 aaPredicted RBP7□□□□□ -1.29
FAM49B-228ENST00000523993 DOCK5Q9H7D0 1870 aa6.99□□□□□ -1.29
FAM49B-228ENST00000523993 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.99□□□□□ -1.29
FAM49B-228ENST00000523993 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms