RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 TAF1DQ9H5J8 278 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 DCP1AQ9NPI6 582 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 RNF14Q9UBS8 474 aa14.09□□□□□ -0.15
TRAPPC9-208ENST00000520857 SPEF2Q9C093 1822 aa14.08□□□□□ -0.15
TRAPPC9-208ENST00000520857 A0A1W2PQJ5 194 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 PPP1R12BO60237 982 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 NEBLO76041 1014 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 VIMP08670 466 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 GNA11P29992 359 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 KRT25Q7Z3Z0 450 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 PEX26Q7Z412 305 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 MYOCDQ8IZQ8 938 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 KIAA0895Q8NCT3 520 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 PURBQ96QR8 312 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 PACSIN1Q9BY11 444 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 FBXL5Q9UKA1 691 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 ATP8A1Q9Y2Q0 1164 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 POTEMA6NI47 508 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 FSBPO95073 299 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 DHX9Q08211 1270 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 DCAF17Q5H9S7 520 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 IQCKQ8N0W5 287 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 CCDC24Q8N4L8 307 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 RIOK1Q9BRS2 568 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 MARF1Q9Y4F3 1742 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 CTNND1O60716 968 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 PRDX5P30044 214 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 ELF1P32519 619 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 ZNF662Q6ZS27 426 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 PARP9Q8IXQ6 854 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 RNF10Q8N5U6 811 aaKnown RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 SLC44A5Q8NCS7 719 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 ZKSCAN4Q969J2 545 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 VCPKMTQ9H867 229 aa14.08□□□□□ -0.16
TRAPPC9-208ENST00000520857 BUB1BO60566 1050 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 SERPING1P05155 500 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 ITIH3Q06033 890 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 HERC4Q5GLZ8 1057 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 MYMKA6NI61 221 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 DAPK3O43293 454 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 HSD17B3P37058 310 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 IFNAR2P48551 515 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 CDK17Q00537 523 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 MECOMQ03112 1051 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 RPAINQ86UA6 219 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 ANKS4BQ8N8V4 417 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 RUBCNQ92622 972 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 AK8Q96MA6 479 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 AMACRQ9UHK6 382 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 C1orf167Q5SNV9 1468 aa14.07□□□□□ -0.16
TRAPPC9-208ENST00000520857 A0A1B0GUA9 196 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 SCP2P22307 547 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 IFI16Q16666 785 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 FIGNQ5HY92 759 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 VPS36Q86VN1 386 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 REXO1Q8N1G1 1221 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 C4orf32Q8N8J7 132 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 A0A087X0T9 212 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 FAM228BP0C875 321 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 CYP19A1P11511 503 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 KRT13P13646 458 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 SMTNP53814 917 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 CDC37Q16543 378 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 MDM1Q8TC05 714 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 DDX12PQ92771 950 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 SLC24A3Q9HC58 644 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 COL4A3BPQ9Y5P4 624 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 SART1O43290 800 aaKnown RBP14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 PPP2R5AQ15172 486 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 CYB5D1Q6P9G0 228 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 USP17L2Q6R6M4 530 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 CADPS2Q86UW7 1296 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 TEX2Q8IWB9 1127 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 GLIS3Q8NEA6 775 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 CCDC26Q8TAB7 109 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 ACSBG1Q96GR2 724 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 ACTR5Q9H9F9 607 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 SIK3Q9Y2K2 1263 aa14.06□□□□□ -0.16
TRAPPC9-208ENST00000520857 LAD1O00515 517 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 FKBP3Q00688 224 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 FAM26FQ5R3K3 315 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 SEC16BQ96JE7 1060 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 C7orf25Q9BPX7 421 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 TMEM260Q9NX78 707 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 ARPP21Q9UBL0 812 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 UTP11Q9Y3A2 253 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 NID2Q14112 1375 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 PCP11498 1178 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 PPP2R2AP63151 447 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 FAM133BQ5BKY9 247 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 UNC13DQ70J99 1090 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 HVCN1Q96D96 273 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 GDF3Q9NR23 364 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 DDX20Q9UHI6 824 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 PGRMC1O00264 195 aaKnown RBP14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 ERVK-9P63128 1117 aa14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 MAP2K1Q02750 393 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC9-208ENST00000520857 TMED8Q6PL24 325 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms