RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 CCDC144CPQ8IYA2 1237 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 CHTF18Q8WVB6 975 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 SLC2A13Q96QE2 648 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 STRBPQ96SI9 672 aaKnown RBP8.64□□□□□ -1.03
CLK4-202ENST00000519132 NAA15Q9BXJ9 866 aaKnown RBP8.64□□□□□ -1.03
CLK4-202ENST00000519132 MORC2Q9Y6X9 1032 aaPredicted RBP8.64□□□□□ -1.03
CLK4-202ENST00000519132 LINC01387J3KSC0 135 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 XPOTO43592 962 aaKnown RBP8.64□□□□□ -1.03
CLK4-202ENST00000519132 VAMP4O75379 141 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 SRGAP2CP0DJJ0 459 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 KCNJ6P48051 423 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 ZRSR2Q15696 482 aaKnown RBP8.64□□□□□ -1.03
CLK4-202ENST00000519132 BVESQ8NE79 360 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 C1orf159Q96HA4 380 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 NEUROD6Q96NK8 337 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 MKRN2Q9H000 416 aaKnown RBP8.64□□□□□ -1.03
CLK4-202ENST00000519132 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 OVOS2A0A0J9YW53 1432 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 OVOS2Q6IE36 1432 aa8.64□□□□□ -1.03
CLK4-202ENST00000519132 INSRP06213 1382 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 TTC21BQ7Z4L5 1316 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 ZRANB2O95218 330 aaKnown RBP eCLIP8.63□□□□□ -1.03
CLK4-202ENST00000519132 TMEM95Q3KNT9 176 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 UTP14CQ5TAP6 766 aaKnown RBP8.63□□□□□ -1.03
CLK4-202ENST00000519132 PNMA8AQ86V59 439 aaPredicted RBP8.63□□□□□ -1.03
CLK4-202ENST00000519132 NOL6Q9H6R4 1146 aaKnown RBP8.63□□□□□ -1.03
CLK4-202ENST00000519132 PLCB1Q9NQ66 1216 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 CASS4Q9NQ75 786 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 ALS2Q96Q42 1657 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 SNUPNO95149 360 aaKnown RBP8.63□□□□□ -1.03
CLK4-202ENST00000519132 ASLP04424 464 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 PTPRAP18433 802 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 LPOP22079 712 aaPredicted RBP8.63□□□□□ -1.03
CLK4-202ENST00000519132 ECI1P42126 302 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 SCNN1BP51168 640 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 CHAF1AQ13111 956 aaPredicted RBP8.63□□□□□ -1.03
CLK4-202ENST00000519132 ATP13A4Q4VNC1 1196 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 MICALL1Q8N3F8 863 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 SDR16C5Q8N3Y7 309 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 CENPOQ9BU64 300 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 EMILIN2Q9BXX0 1053 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 AATKQ6ZMQ8 1374 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 ARNTLO00327 626 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 PURAQ00577 322 aaKnown RBP8.63□□□□□ -1.03
CLK4-202ENST00000519132 MAP7Q14244 749 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 DPY19L1Q2PZI1 675 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 TMEM201Q5SNT2 666 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 NGDNQ8NEJ9 315 aaKnown RBP8.63□□□□□ -1.03
CLK4-202ENST00000519132 MRGPRX3Q96LB0 322 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 DNM3Q9UQ16 869 aa8.63□□□□□ -1.03
CLK4-202ENST00000519132 SMG6Q86US8 1419 aaKnown RBP8.62□□□□□ -1.03
CLK4-202ENST00000519132 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 PRSS47A8MTI9 375 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 LONRF1Q17RB8 773 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 TSPAN18Q96SJ8 248 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 NAP1L4Q99733 375 aaKnown RBP8.62□□□□□ -1.03
CLK4-202ENST00000519132 CORO1BQ9BR76 489 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 MTA3Q9BTC8 594 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 ZNF700Q9H0M5 742 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 AKT3Q9Y243 479 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 NHSL1Q5SYE7 1610 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 AGR2O95994 175 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 ANP32AP39687 249 aaKnown RBP8.62□□□□□ -1.03
CLK4-202ENST00000519132 ZC3H12BQ5HYM0 836 aaKnown RBP8.62□□□□□ -1.03
CLK4-202ENST00000519132 KRBA2Q6ZNG9 492 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 AHCYL2Q96HN2 611 aaKnown RBP8.62□□□□□ -1.03
CLK4-202ENST00000519132 MAGEB10Q96LZ2 347 aaPredicted RBP8.62□□□□□ -1.03
CLK4-202ENST00000519132 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 GPRC5CQ9NQ84 441 aa8.62□□□□□ -1.03
CLK4-202ENST00000519132 CGGBP1Q9UFW8 167 aaPredicted RBP8.62□□□□□ -1.03
CLK4-202ENST00000519132 TRAF5O00463 557 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 ZNF500O60304 480 aaPredicted RBP8.61□□□□□ -1.03
CLK4-202ENST00000519132 GOLIM4O00461 696 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 AP1G1O43747 822 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 MSCO60682 206 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 SLC5A1P13866 664 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 PTSQ03393 145 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 CLUL1Q15846 466 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 C1orf162Q8NEQ5 155 aaPredicted RBP8.61□□□□□ -1.03
CLK4-202ENST00000519132 PPM1EQ8WY54 764 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 KLHDC7BQ96G42 594 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 YY1AP1Q9H869 796 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 C9orf78Q9NZ63 289 aaPredicted RBP8.61□□□□□ -1.03
CLK4-202ENST00000519132 IQSEC2Q5JU85 1478 aa8.61□□□□□ -1.03
CLK4-202ENST00000519132 PHRF1Q9P1Y6 1649 aaKnown RBP8.6□□□□□ -1.03
CLK4-202ENST00000519132 CD247P20963 164 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 GFRA1P56159 465 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 GUCY1A3Q02108 690 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 MORC3Q14149 939 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 ZC3H12AQ5D1E8 599 aaKnown RBP8.6□□□□□ -1.03
CLK4-202ENST00000519132 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 GTF2IRD2BQ6EKJ0 949 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 ELMSAN1Q6PJG2 1045 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 SYDE1Q6ZW31 735 aaPredicted RBP8.6□□□□□ -1.03
CLK4-202ENST00000519132 GTF2IRD2Q86UP8 949 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 AHI1Q8N157 1196 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 OR2W6PQ8NHA6 318 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 PCDHGC5Q9Y5F6 944 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 MEIS1O00470 390 aa8.6□□□□□ -1.03
CLK4-202ENST00000519132 PPM1FP49593 454 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms