RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 PRAG1Q86YV5 1406 aa6.67□□□□□ -1.34
HDAC2-204ENST00000518756 ZMYM4Q5VZL5 1548 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 ARAP3Q8WWN8 1544 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 E9PCH4 1651 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 AURKAO14965 403 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 AMPD2Q01433 879 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 PLEKHN1Q494U1 663 aaPredicted RBP6.66□□□□□ -1.34
HDAC2-204ENST00000518756 POMZP3Q6PJE2 187 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 LUC7LQ9NQ29 371 aaKnown RBP6.66□□□□□ -1.34
HDAC2-204ENST00000518756 PCDHA5Q9Y5H7 936 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 EIF3AQ14152 1382 aaKnown RBP6.66□□□□□ -1.34
HDAC2-204ENST00000518756 RTEL1-TNFRSF6BF6WH68 1400 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 ATP10AO60312 1499 aa6.66□□□□□ -1.34
HDAC2-204ENST00000518756 LIMS1P48059 325 aa6.65□□□□□ -1.34
HDAC2-204ENST00000518756 CORO7P57737 925 aa6.65□□□□□ -1.34
HDAC2-204ENST00000518756 ZNF200P98182 395 aaPredicted RBP6.65□□□□□ -1.34
HDAC2-204ENST00000518756 ZC3H14Q6PJT7 736 aaKnown RBP6.65□□□□□ -1.34
HDAC2-204ENST00000518756 DBX2Q6ZNG2 339 aa6.65□□□□□ -1.34
HDAC2-204ENST00000518756 ZNF513Q8N8E2 541 aaPredicted RBP6.65□□□□□ -1.34
HDAC2-204ENST00000518756 LINC01356Q8N9X3 169 aa6.65□□□□□ -1.34
HDAC2-204ENST00000518756 PNISRQ8TF01 805 aaKnown RBP6.65□□□□□ -1.34
HDAC2-204ENST00000518756 GMLQ99445 158 aa6.65□□□□□ -1.34
HDAC2-204ENST00000518756 MCMBPQ9BTE3 642 aa6.65□□□□□ -1.34
HDAC2-204ENST00000518756 AKT3Q9Y243 479 aa6.65□□□□□ -1.34
HDAC2-204ENST00000518756 BACE2Q9Y5Z0 518 aa6.65□□□□□ -1.34
HDAC2-204ENST00000518756 GPRASP1Q5JY77 1395 aa6.65□□□□□ -1.35
HDAC2-204ENST00000518756 TTC37Q6PGP7 1564 aa6.65□□□□□ -1.35
HDAC2-204ENST00000518756 ZCCHC11Q5TAX3 1644 aaKnown RBP6.65□□□□□ -1.35
HDAC2-204ENST00000518756 STXBP3O00186 592 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 NOP56O00567 594 aaKnown RBP6.64□□□□□ -1.35
HDAC2-204ENST00000518756 VAMP4O75379 141 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 PFKLP17858 780 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 DNAJA1P31689 397 aaKnown RBP6.64□□□□□ -1.35
HDAC2-204ENST00000518756 ETFBP38117 255 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 SEPHS1P49903 392 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 IRX6P78412 446 aaPredicted RBP6.64□□□□□ -1.35
HDAC2-204ENST00000518756 RBM10P98175 930 aaKnown RBP6.64□□□□□ -1.35
HDAC2-204ENST00000518756 FXNQ16595 210 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 DPY19L1Q2PZI1 675 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 RGL3Q3MIN7 710 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 CCDC184Q52MB2 194 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 LARP1BQ659C4 914 aaKnown RBP6.64□□□□□ -1.35
HDAC2-204ENST00000518756 MCF2L2Q86YR7 1114 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 BVESQ8NE79 360 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 TEPSINQ96N21 525 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 APEX2Q9UBZ4 518 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 EMC9Q9Y3B6 208 aa6.64□□□□□ -1.35
HDAC2-204ENST00000518756 PRDM15P57071 1507 aaPredicted RBP6.64□□□□□ -1.35
HDAC2-204ENST00000518756 TRBV23OR9-2A0A075B6M9 112 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 A0A1W2PQJ5 194 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 ZC3H12DA2A288 527 aaKnown RBP6.63□□□□□ -1.35
HDAC2-204ENST00000518756 C2orf71A6NGG8 1288 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 SPAG9O60271 1321 aaKnown RBP6.63□□□□□ -1.35
HDAC2-204ENST00000518756 CEP152O94986 1710 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 L1CAMP32004 1257 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 ANP32AP39687 249 aaKnown RBP6.63□□□□□ -1.35
HDAC2-204ENST00000518756 MVKQ03426 396 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 C6orf15Q6UXA7 325 aaPredicted RBP6.63□□□□□ -1.35
HDAC2-204ENST00000518756 MAGI2Q86UL8 1455 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 FAM178BQ8IXR5 827 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 NLGN2Q8NFZ4 835 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 PDLIM7Q9NR12 457 aa6.63□□□□□ -1.35
HDAC2-204ENST00000518756 ABCC1P33527 1531 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 WDR7Q9Y4E6 1490 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 LRPPRCP42704 1394 aaKnown RBP6.62□□□□□ -1.35
HDAC2-204ENST00000518756 MSL3P1P0C860 447 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 MAPKAPK2P49137 400 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 CNGB1Q14028 1251 aaPredicted RBP6.62□□□□□ -1.35
HDAC2-204ENST00000518756 CBX2Q14781 532 aaPredicted RBP6.62□□□□□ -1.35
HDAC2-204ENST00000518756 NR1I3Q14994 352 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.62□□□□□ -1.35
HDAC2-204ENST00000518756 BDH2Q9BUT1 245 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 R3HCC1Q9Y3T6 440 aaKnown RBP6.62□□□□□ -1.35
HDAC2-204ENST00000518756 KNSTRNQ9Y448 316 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 SPHKAPQ2M3C7 1700 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 KIAA1210Q9ULL0 1709 aa6.62□□□□□ -1.35
HDAC2-204ENST00000518756 NEURL4Q96JN8 1562 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 A2MP01023 1474 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 PARD3Q8TEW0 1356 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 RNF123Q5XPI4 1314 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 DDAH1O94760 285 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 KCNH1O95259 989 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 WDR43Q15061 677 aaKnown RBP eCLIP6.61□□□□□ -1.35
HDAC2-204ENST00000518756 BICRALQ6AI39 1079 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 FRMD5Q7Z6J6 570 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 NLGN1Q8N2Q7 840 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 NGEFQ8N5V2 710 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 TP53I13Q8NBR0 393 aaPredicted RBP6.61□□□□□ -1.35
HDAC2-204ENST00000518756 TET3O43151 1660 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 RNF17Q9BXT8 1623 aaKnown RBP6.61□□□□□ -1.35
HDAC2-204ENST00000518756 CFAP74Q9C0B2 1584 aa6.61□□□□□ -1.35
HDAC2-204ENST00000518756 TRPM2O94759 1503 aa6.6□□□□□ -1.35
HDAC2-204ENST00000518756 KIF1BO60333 1816 aa6.6□□□□□ -1.35
HDAC2-204ENST00000518756 FFAR3O14843 346 aa6.6□□□□□ -1.35
HDAC2-204ENST00000518756 SRGAP3O43295 1099 aa6.6□□□□□ -1.35
HDAC2-204ENST00000518756 ADRB1P08588 477 aa6.6□□□□□ -1.35
HDAC2-204ENST00000518756 PAMP19021 973 aa6.6□□□□□ -1.35
HDAC2-204ENST00000518756 TACR1P25103 407 aa6.6□□□□□ -1.35
HDAC2-204ENST00000518756 KCNC1P48547 511 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms