RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 TTBK2Q6IQ55 1244 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 LLGL2Q6P1M3 1020 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 ZNF765Q7L2R6 523 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 TBC1D16Q8TBP0 767 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 GRIN3AQ8TCU5 1115 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 TMEM40Q8WWA1 233 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 POLLQ9UGP5 575 aa7.92□□□□□ -1.14
CCDC6-203ENST00000518638 ASTN2O75129 1339 aaPredicted RBP7.92□□□□□ -1.14
CCDC6-203ENST00000518638 H0YGN5 161 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 WDHD1O75717 1129 aaPredicted RBP7.91□□□□□ -1.14
CCDC6-203ENST00000518638 UFL1O94874 794 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 ZNF865P0CJ78 1059 aaPredicted RBP7.91□□□□□ -1.14
CCDC6-203ENST00000518638 RPS26P62854 115 aaKnown RBP7.91□□□□□ -1.14
CCDC6-203ENST00000518638 GPSM2P81274 684 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 DCTN1Q14203 1278 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 LDLRAD1Q5T700 205 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 MOB2Q70IA6 237 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 WFDC3Q8IUB2 231 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 WDR89Q96FK6 387 aaPredicted RBP7.91□□□□□ -1.14
CCDC6-203ENST00000518638 HTATIP2Q9BUP3 242 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 PCDHGC5Q9Y5F6 944 aa7.91□□□□□ -1.14
CCDC6-203ENST00000518638 DLG5Q8TDM6 1919 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 ZNF646O15015 1829 aaPredicted RBP7.9□□□□□ -1.14
CCDC6-203ENST00000518638 RLBP1P12271 317 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 LIG3P49916 1009 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 RPS8P62241 208 aaKnown RBP7.9□□□□□ -1.14
CCDC6-203ENST00000518638 MAP7Q14244 749 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 BHLHE22Q8NFJ8 381 aaPredicted RBP7.9□□□□□ -1.14
CCDC6-203ENST00000518638 CD99L2Q8TCZ2 262 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 GPBAR1Q8TDU6 330 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 CELF1Q92879 486 aaKnown RBP7.9□□□□□ -1.14
CCDC6-203ENST00000518638 GMLQ99445 158 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 GSX1Q9H4S2 264 aaPredicted RBP7.9□□□□□ -1.14
CCDC6-203ENST00000518638 RC3H2Q9HBD1 1191 aaKnown RBP7.9□□□□□ -1.14
CCDC6-203ENST00000518638 PPP2R3BQ9Y5P8 575 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 NR2E3Q9Y5X4 410 aa7.9□□□□□ -1.14
CCDC6-203ENST00000518638 MKI67P46013 3256 aaKnown RBP7.9□□□□□ -1.15
CCDC6-203ENST00000518638 TRIOBPQ9H2D6 2365 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 XDHP47989 1333 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 WNT10BO00744 389 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 TMPRSS2O15393 492 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 SLFN14P0C7P3 912 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 CAPN2P17655 700 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 VAMP1P23763 118 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 PRMT2P55345 433 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 MAP3K11Q16584 847 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 LRP10Q7Z4F1 713 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 SPRED2Q7Z698 418 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 MISP3Q96FF7 219 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 PNNQ9H307 717 aaKnown RBP7.89□□□□□ -1.15
CCDC6-203ENST00000518638 R3HDMLQ9H3Y0 253 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 KCNQ5Q9NR82 932 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 BABAM1Q9NWV8 329 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 MIS18AQ9NYP9 233 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 PPP1R9AQ9ULJ8 1098 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 AP4E1Q9UPM8 1137 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 ACTL7BQ9Y614 415 aa7.89□□□□□ -1.15
CCDC6-203ENST00000518638 NCANO14594 1321 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 ID3Q02535 119 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 CRHR2Q13324 411 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 KIF22Q14807 665 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 AGMOQ6ZNB7 445 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 DPF3Q92784 378 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 WNK4Q96J92 1243 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 FAM84AQ96KN4 292 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 CRIM1Q9NZV1 1036 aa7.88□□□□□ -1.15
CCDC6-203ENST00000518638 ECM29Q5VYK3 1845 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 MED23Q9ULK4 1368 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 IGF2BP3O00425 579 aaKnown RBP eCLIP7.87□□□□□ -1.15
CCDC6-203ENST00000518638 EIF2S2P20042 333 aaKnown RBP7.87□□□□□ -1.15
CCDC6-203ENST00000518638 RAB6AP20340 208 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 NBPF9Q3BBW0 867 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 SUPT20HL1Q3ZLR7 823 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 CCDC152Q4G0S7 254 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 STRIP1Q5VSL9 837 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 PRAMEF18Q5VWM3 479 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 LILRA6Q6PI73 481 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 COPS6Q7L5N1 327 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 DYMQ7RTS9 669 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 GAL3ST3Q96A11 431 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 KRTAP17-1Q9BYP8 105 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 TSPYL4Q9UJ04 414 aa7.87□□□□□ -1.15
CCDC6-203ENST00000518638 PRRG2O14669 202 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 MYO1BO43795 1136 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 NFICP08651 508 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 FUT4P22083 530 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 AIMP1Q12904 312 aaKnown RBP7.86□□□□□ -1.15
CCDC6-203ENST00000518638 PRKG1Q13976 671 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 ZC3H12AQ5D1E8 599 aaKnown RBP7.86□□□□□ -1.15
CCDC6-203ENST00000518638 ANKRD13AQ8IZ07 590 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 TMEM87AQ8NBN3 555 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 PHC3Q8NDX5 983 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 PLBD2Q8NHP8 589 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 XAGE3Q8WTP9 111 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 FAM89AQ96GI7 184 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 TOX2Q96NM4 488 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 THUMPD2Q9BTF0 503 aaKnown RBP7.86□□□□□ -1.15
CCDC6-203ENST00000518638 RSRP1Q9BUV0 290 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 BACH2Q9BYV9 841 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 ATXN3LQ9H3M9 355 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms