RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 BMP2KQ9NSY1 1161 aaPredicted RBP29.62■■■□□ 2.33
COL13A1-210ENST00000517713 PLA2G4BP0C869 781 aa29.62■■■□□ 2.33
COL13A1-210ENST00000517713 EHHADHQ08426 723 aa29.62■■■□□ 2.33
COL13A1-210ENST00000517713 PRPF38AQ8NAV1 312 aaKnown RBP29.62■■■□□ 2.33
COL13A1-210ENST00000517713 IGLV3-22A0A075B6J6 115 aa29.61■■■□□ 2.33
COL13A1-210ENST00000517713 CCP110O43303 1012 aa29.61■■■□□ 2.33
COL13A1-210ENST00000517713 SSBP05455 408 aaKnown RBP eCLIP29.61■■■□□ 2.33
COL13A1-210ENST00000517713 PANX2Q96RD6 677 aa29.61■■■□□ 2.33
COL13A1-210ENST00000517713 SLF1Q9BQI6 1058 aa29.61■■■□□ 2.33
COL13A1-210ENST00000517713 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.61■■■□□ 2.33
COL13A1-210ENST00000517713 ICAM1P05362 532 aa29.61■■■□□ 2.33
COL13A1-210ENST00000517713 CENPPQ6IPU0 288 aa29.61■■■□□ 2.33
COL13A1-210ENST00000517713 DCAF15Q66K64 600 aa29.6■■■□□ 2.33
COL13A1-210ENST00000517713 CATSPER3Q86XQ3 398 aa29.6■■■□□ 2.33
COL13A1-210ENST00000517713 GUF1Q8N442 669 aaKnown RBP29.6■■■□□ 2.33
COL13A1-210ENST00000517713 AGBL1Q96MI9 1066 aa29.6■■■□□ 2.33
COL13A1-210ENST00000517713 SEMA6BQ9H3T3 888 aa29.6■■■□□ 2.33
COL13A1-210ENST00000517713 VAV3Q9UKW4 847 aa29.6■■■□□ 2.33
COL13A1-210ENST00000517713 CCPG1Q9ULG6 757 aa29.6■■■□□ 2.33
COL13A1-210ENST00000517713 RPA1P27694 616 aa29.59■■■□□ 2.33
COL13A1-210ENST00000517713 UBXN1Q04323 297 aa29.59■■■□□ 2.33
COL13A1-210ENST00000517713 FAM114A1Q8IWE2 563 aa29.59■■■□□ 2.33
COL13A1-210ENST00000517713 CPLX3Q8WVH0 158 aa29.59■■■□□ 2.33
COL13A1-210ENST00000517713 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.59■■■□□ 2.33
COL13A1-210ENST00000517713 PAXBP1Q9Y5B6 917 aa29.59■■■□□ 2.33
COL13A1-210ENST00000517713 COASYQ13057 564 aa29.59■■■□□ 2.33
COL13A1-210ENST00000517713 PANK4Q9NVE7 773 aa29.59■■■□□ 2.33
COL13A1-210ENST00000517713 ZNF536O15090 1300 aa29.58■■■□□ 2.33
COL13A1-210ENST00000517713 POTEFA5A3E0 1075 aa29.58■■■□□ 2.33
COL13A1-210ENST00000517713 TPM1P09493 284 aa29.58■■■□□ 2.33
COL13A1-210ENST00000517713 POTEIP0CG38 1075 aa29.58■■■□□ 2.33
COL13A1-210ENST00000517713 POTEGQ6S5H5 508 aa29.58■■■□□ 2.33
COL13A1-210ENST00000517713 POTEEQ6S8J3 1075 aa29.58■■■□□ 2.33
COL13A1-210ENST00000517713 WDR18Q9BV38 432 aa29.58■■■□□ 2.33
COL13A1-210ENST00000517713 LGALS16A8MUM7 142 aa29.57■■■□□ 2.32
COL13A1-210ENST00000517713 KIF2AO00139 706 aaPredicted RBP29.57■■■□□ 2.32
COL13A1-210ENST00000517713 GYPCP04921 128 aa29.57■■■□□ 2.32
COL13A1-210ENST00000517713 SPATA31C1P0DKV0 1188 aa29.57■■■□□ 2.32
COL13A1-210ENST00000517713 GPBP1Q86WP2 473 aa29.57■■■□□ 2.32
COL13A1-210ENST00000517713 MFAP3LO75121 409 aa29.57■■■□□ 2.32
COL13A1-210ENST00000517713 CASP14P31944 242 aa29.57■■■□□ 2.32
COL13A1-210ENST00000517713 ANGEL2Q5VTE6 544 aaKnown RBP29.57■■■□□ 2.32
COL13A1-210ENST00000517713 ZNF592Q92610 1267 aa29.57■■■□□ 2.32
COL13A1-210ENST00000517713 RIOK3O14730 519 aaKnown RBP29.56■■■□□ 2.32
COL13A1-210ENST00000517713 CYP11B2P19099 503 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 SLC12A3P55017 1021 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 UBXN2AP68543 259 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 DGKZQ13574 1117 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 TRIM14Q14142 442 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 APOBEC3FQ8IUX4 373 aaKnown RBP29.56■■■□□ 2.32
COL13A1-210ENST00000517713 CNGA4Q8IV77 575 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 CCDC65Q8IXS2 484 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 MB21D1Q8N884 522 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 HOOK2Q96ED9 719 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 TANGO6Q9C0B7 1094 aa29.56■■■□□ 2.32
COL13A1-210ENST00000517713 HSD17B4P51659 736 aa29.55■■■□□ 2.32
COL13A1-210ENST00000517713 MTMR2Q13614 643 aa29.55■■■□□ 2.32
COL13A1-210ENST00000517713 CNOT6LQ96LI5 555 aaKnown RBP29.55■■■□□ 2.32
COL13A1-210ENST00000517713 TUBGCP2Q9BSJ2 902 aa29.55■■■□□ 2.32
COL13A1-210ENST00000517713 DNM3Q9UQ16 869 aa29.55■■■□□ 2.32
COL13A1-210ENST00000517713 ZNF507Q8TCN5 953 aa29.55■■■□□ 2.32
COL13A1-210ENST00000517713 CCDC51Q96ER9 411 aa29.55■■■□□ 2.32
COL13A1-210ENST00000517713 NAA15Q9BXJ9 866 aaKnown RBP29.55■■■□□ 2.32
COL13A1-210ENST00000517713 ZNF112Q9UJU3 913 aa29.55■■■□□ 2.32
COL13A1-210ENST00000517713 ZSCAN12O43309 604 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 PRKCSHP14314 528 aaPredicted RBP29.54■■■□□ 2.32
COL13A1-210ENST00000517713 GTF2F1P35269 517 aaKnown RBP eCLIP29.54■■■□□ 2.32
COL13A1-210ENST00000517713 FXR1P51114 621 aaKnown RBP eCLIP29.54■■■□□ 2.32
COL13A1-210ENST00000517713 USP14P54578 494 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 CEP55Q53EZ4 464 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 EEF2KMTQ96G04 330 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 POLR3CQ9BUI4 534 aaPredicted RBP29.54■■■□□ 2.32
COL13A1-210ENST00000517713 EMILIN3Q9NT22 766 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 DOCK1Q14185 1865 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 MEIS1O00470 390 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 PES1O00541 588 aaKnown RBP29.54■■■□□ 2.32
COL13A1-210ENST00000517713 VCAM1P19320 739 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 PSMC6P62333 389 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 FAM26FQ5R3K3 315 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 SCYL3Q8IZE3 742 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 SLC38A10Q9HBR0 1119 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 GPRC5DQ9NZD1 345 aa29.54■■■□□ 2.32
COL13A1-210ENST00000517713 NPHP3-ACAD11A0A0J9YXS1 232 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 A0A1W2PQC6 194 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 DYNC1I1O14576 645 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 FLOT1O75955 427 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 LRRC63Q05C16 580 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 LRRC41Q15345 812 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 ARSHQ5FYA8 562 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 LRCH2Q5VUJ6 765 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 OTOP1Q7RTM1 612 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 TRPM4Q8TD43 1214 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 CLEC4DQ8WXI8 215 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 SLC5A5Q92911 643 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 EIF2AK1Q9BQI3 630 aaKnown RBP29.53■■■□□ 2.32
COL13A1-210ENST00000517713 PPP2R2CQ9Y2T4 447 aa29.53■■■□□ 2.32
COL13A1-210ENST00000517713 PITPNM2Q9BZ72 1349 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 EML1O00423 815 aa29.52■■■□□ 2.32
COL13A1-210ENST00000517713 KRT18P05783 430 aaKnown RBP29.52■■■□□ 2.32
COL13A1-210ENST00000517713 DNM2P50570 870 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms