RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 IGKV6D-41A0A0C4DH26 115 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 ARIH2O95376 493 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 SP100P23497 879 aaPredicted RBP12.86□□□□□ -0.35
SNF8-207ENST00000509995 DNAJB1P25685 340 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 PDE4DQ08499 809 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 IKQ13123 557 aaPredicted RBP12.86□□□□□ -0.35
SNF8-207ENST00000509995 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 CWF19L1Q69YN2 538 aaKnown RBP12.86□□□□□ -0.35
SNF8-207ENST00000509995 CTR9Q6PD62 1173 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 CHURC1Q8WUH1 139 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 DDRGK1Q96HY6 314 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 HAUS7Q99871 368 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 KATNAL1Q9BW62 490 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 CCPG1Q9ULG6 757 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
SNF8-207ENST00000509995 PLXNA4Q9HCM2 1894 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 MYH7P12883 1935 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 KIAA1217Q5T5P2 1943 aa12.86□□□□□ -0.35
SNF8-207ENST00000509995 CASTP20810 708 aaKnown RBP12.85□□□□□ -0.35
SNF8-207ENST00000509995 EDNRBP24530 442 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 THPOP40225 353 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 PSEN2P49810 448 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 SNAP25P60880 206 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 ZNF200P98182 395 aaPredicted RBP12.85□□□□□ -0.35
SNF8-207ENST00000509995 POLA2Q14181 598 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 RBM23Q86U06 439 aaKnown RBP12.85□□□□□ -0.35
SNF8-207ENST00000509995 CYP2W1Q8TAV3 490 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 P2RX5Q93086 422 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 CEP95Q96GE4 821 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 ALG1Q9BT22 464 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 SMOC2Q9H3U7 446 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 MYH7BA7E2Y1 1941 aa12.85□□□□□ -0.35
SNF8-207ENST00000509995 SURF6O75683 361 aaKnown RBP12.84□□□□□ -0.35
SNF8-207ENST00000509995 TTLL1O95922 423 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 F2P00734 622 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 ITGB1P05556 798 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 RBM10P98175 930 aaKnown RBP12.84□□□□□ -0.35
SNF8-207ENST00000509995 ARHGAP1Q07960 439 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 MFSD10Q14728 455 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 KIAA0753Q2KHM9 967 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 SERINC5Q86VE9 423 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 STAG1Q8WVM7 1258 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 RUBCNQ92622 972 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 OSBPL7Q9BZF2 842 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 MKNK2Q9HBH9 465 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 MTMR4Q9NYA4 1195 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
SNF8-207ENST00000509995 TTC3P53804 2025 aa12.84□□□□□ -0.35
SNF8-207ENST00000509995 PTPDC1A2A3K4 754 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 HAS3O00219 553 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 NFIBO00712 420 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 ICAM1P05362 532 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 AOC1P19801 751 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 HIC1Q14526 733 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 DGKDQ16760 1214 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 KIAA0319Q5VV43 1072 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 CCDC62Q6P9F0 684 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 FLCNQ8NFG4 579 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 VN1R2Q8NFZ6 395 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 SPPL3Q8TCT6 385 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 SSH3Q8TE77 659 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 ATP8B4Q8TF62 1192 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 APBB2Q92870 758 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 NEK1Q96PY6 1258 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 MPHOSPH6Q99547 160 aaKnown RBP12.83□□□□□ -0.36
SNF8-207ENST00000509995 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 NR2E1Q9Y466 385 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 R4GN57 208 aa12.83□□□□□ -0.36
SNF8-207ENST00000509995 GOLIM4O00461 696 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 PLA2G6O60733 806 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 GH1P01241 217 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 ZNF286BP0CG31 522 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 CALML3P27482 149 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 SLC1A4P43007 532 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 BTG3Q14201 252 aaPredicted RBP12.82□□□□□ -0.36
SNF8-207ENST00000509995 SLFNL1Q499Z3 407 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 NAALADL2Q58DX5 795 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 DHX37Q8IY37 1157 aaKnown RBP12.82□□□□□ -0.36
SNF8-207ENST00000509995 STK11IPQ8N1F8 1099 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 DCLK2Q8N568 766 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 DTWD2Q8NBA8 298 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 POF1BQ8WVV4 589 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 GMCL1Q96IK5 515 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 TLE6Q9H808 572 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 TSHZ2Q9NRE2 1034 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 PRR12Q9ULL5 1215 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 SLC4A4Q9Y6R1 1079 aa12.82□□□□□ -0.36
SNF8-207ENST00000509995 SPEGQ15772 3267 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 FSD2A1L4K1 749 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 PI15O43692 258 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 ARP10275 920 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 SDHBP21912 280 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 ADD2P35612 726 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 CHST3Q7LGC8 479 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 ZNF689Q96CS4 500 aaPredicted RBP12.81□□□□□ -0.36
SNF8-207ENST00000509995 S1PR5Q9H228 398 aa12.81□□□□□ -0.36
SNF8-207ENST00000509995 NOP58Q9Y2X3 529 aaKnown RBP12.81□□□□□ -0.36
SNF8-207ENST00000509995 SETXQ7Z333 2677 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms