RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 SPATA33Q96N06 139 aa15.7■□□□□ 0.1
CCHCR1-227ENST00000508852 TSPYL2Q9H2G4 693 aaPredicted RBP15.7■□□□□ 0.1
CCHCR1-227ENST00000508852 LY9Q9HBG7 655 aa15.7■□□□□ 0.1
CCHCR1-227ENST00000508852 MYO9BQ13459 2157 aa15.7■□□□□ 0.1
CCHCR1-227ENST00000508852 SCN5AQ14524 2016 aa15.7■□□□□ 0.1
CCHCR1-227ENST00000508852 FRMPD4Q14CM0 1322 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 HAS3O00219 553 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 PIK3CDO00329 1044 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 PRC1O43663 620 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 GGPS1O95749 300 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 ICAM3P32942 547 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 KCNJ6P48051 423 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 ANTXR2P58335 489 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 KIAA0753Q2KHM9 967 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 GDF6Q6KF10 455 aaPredicted RBP15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 FCHSD1Q86WN1 690 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 SMARCC2Q8TAQ2 1214 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 CDHR1Q96JP9 859 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 ESYT1Q9BSJ8 1104 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 USP26Q9BXU7 913 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 NKX2-4Q9H2Z4 354 aa15.69■□□□□ 0.1
CCHCR1-227ENST00000508852 EMSYQ7Z589 1322 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 NOP56O00567 594 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 FIBPO43427 364 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 GNAT1P11488 350 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 BMP2KLQ5H9B9 411 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 CNKSR3Q6P9H4 555 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 LRRC8DQ7L1W4 858 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 CENPQQ7L2Z9 268 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 NLRX1Q86UT6 975 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 INPP4AQ96PE3 977 aaPredicted RBP15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 SENP7Q9BQF6 1050 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 LSG1Q9H089 658 aaKnown RBP15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 PRDM12Q9H4Q4 367 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 HDAC6Q9UBN7 1215 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 SLC12A7Q9Y666 1083 aa15.68■□□□□ 0.1
CCHCR1-227ENST00000508852 CAND2O75155 1236 aa15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 RGS20O76081 388 aa15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 UBA1P22314 1058 aaKnown RBP15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 PCNX4Q63HM2 1172 aa15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 METTL7BQ6UX53 244 aa15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 ALG1Q9BT22 464 aa15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 COL25A1Q9BXS0 654 aaPredicted RBP15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 EHMT1Q9H9B1 1298 aa15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 SENP2Q9HC62 589 aa15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 ANO2Q9NQ90 1003 aa15.67■□□□□ 0.1
CCHCR1-227ENST00000508852 ABHD14A-ACY1A0A1B0GW23 586 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 SPATA31C2B4DYI2 1134 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 H3BRB1 525 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 SH2B2O14492 632 aaPredicted RBP15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 SLC27A2O14975 620 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 CXCL10P02778 98 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 CKBP12277 381 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 NECTIN1Q15223 517 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 SLC35G1Q2M3R5 365 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 HSDL1Q3SXM5 330 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 CREB3L3Q68CJ9 461 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 HERC6Q8IVU3 1022 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 ATXN2LQ8WWM7 1075 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 VWCEQ96DN2 955 aa15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 TUT1Q9H6E5 874 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 ZNF215Q9UL58 517 aaPredicted RBP15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 YBX2Q9Y2T7 364 aaKnown RBP15.66■□□□□ 0.1
CCHCR1-227ENST00000508852 C17orf102A2RUQ5 167 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 MAFGO15525 162 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 GTPBP6O43824 516 aaPredicted RBP15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 ZNF286BP0CG31 522 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 IGFBP4P22692 258 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 RABGGTBP53611 331 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 IKBKEQ14164 716 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 KRT32Q14532 448 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 TJAP1Q5JTD0 557 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 SGMS1Q86VZ5 419 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 PSTPIP2Q9H939 334 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 RBM28Q9NW13 759 aaKnown RBP15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 TAF6LQ9Y6J9 622 aa15.65■□□□□ 0.1
CCHCR1-227ENST00000508852 HMGB1P09429 215 aaKnown RBP15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 POU3F3P20264 500 aaPredicted RBP15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 MRPS9P82933 396 aaKnown RBP15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 SP2Q02086 613 aa15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 FANCBQ8NB91 859 aa15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 IL31RAQ8NI17 732 aa15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 KAT6AQ92794 2004 aa15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 TNPO1Q92973 898 aaKnown RBP15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 GPRASP2Q96D09 838 aa15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 CTAGE1Q96RT6 745 aa15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 C16orf70Q9BSU1 422 aa15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 GLT8D2Q9H1C3 349 aa15.64■□□□□ 0.09
CCHCR1-227ENST00000508852 EYSQ5T1H1 3165 aa15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 SPDYE3A6NKU9 549 aa15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 hCG_1984214I3L0E3 225 aa15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 TLL1O43897 1013 aa15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 LGALS2P05162 132 aa15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 RPLP2P05387 115 aaKnown RBP15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 CA3P07451 260 aa15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 SERINC5Q86VE9 423 aa15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 SRBD1Q8N5C6 995 aaKnown RBP15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 ZNF713Q8N859 430 aaPredicted RBP15.63■□□□□ 0.09
CCHCR1-227ENST00000508852 IL27Q8NEV9 243 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms