RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 MYOCDQ8IZQ8 938 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 TEKT1Q969V4 418 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 MTMR8Q96EF0 704 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 IFIH1Q9BYX4 1025 aaKnown RBP12.12□□□□□ -0.47
LIN54-207ENST00000508171 TANGO6Q9C0B7 1094 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 MLXIPQ9HAP2 919 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 ADAM21Q9UKJ8 722 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 G3V3G9 751 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 TRAF5O00463 557 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
LIN54-207ENST00000508171 KIF11P52732 1056 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 PSMD2Q13200 908 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 QRICH1Q2TAL8 776 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 DCAF8Q5TAQ9 597 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
LIN54-207ENST00000508171 EHBP1Q8NDI1 1231 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 SECISBP2LQ93073 1101 aaKnown RBP12.12□□□□□ -0.47
LIN54-207ENST00000508171 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 PCDHA1Q9Y5I3 950 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 CAPN6Q9Y6Q1 641 aa12.12□□□□□ -0.47
LIN54-207ENST00000508171 DDTLA6NHG4 134 aaPredicted RBP12.11□□□□□ -0.47
LIN54-207ENST00000508171 LRRIQ3A6PVS8 624 aaPredicted RBP12.11□□□□□ -0.47
LIN54-207ENST00000508171 HLA-DOAP06340 250 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 STAT3P40763 770 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 APBA1Q02410 837 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 ZCWPW2Q504Y3 356 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 SLC27A3Q5K4L6 730 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 WDR93Q6P2C0 686 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 HHIPL2Q6UWX4 724 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 KIAA0825Q8IV33 1275 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 ANKRD13CQ8N6S4 541 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 BAP1Q92560 729 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 P2RX7Q99572 595 aaKnown RBP12.11□□□□□ -0.47
LIN54-207ENST00000508171 SMCHD1A6NHR9 2005 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 GREB1LQ9C091 1923 aaPredicted RBP12.11□□□□□ -0.47
LIN54-207ENST00000508171 POTEB3A0JP26 581 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 POTECB2RU33 542 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 AKR1B10O60218 316 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 MOCS3O95396 460 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 FGFR1OPO95684 399 aaKnown RBP12.11□□□□□ -0.47
LIN54-207ENST00000508171 CRKP46108 304 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 FAM26FQ5R3K3 315 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 TMC4Q7Z404 712 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 DEF6Q9H4E7 631 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 NLRC4Q9NPP4 1024 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 SALL4Q9UJQ4 1053 aa12.11□□□□□ -0.47
LIN54-207ENST00000508171 SLC1A4P43007 532 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 FKBP3Q00688 224 aaKnown RBP12.1□□□□□ -0.47
LIN54-207ENST00000508171 SIAH1Q8IUQ4 282 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 GDAP1L1Q96MZ0 367 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 TSG101Q99816 390 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 LRRC27Q9C0I9 530 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 MYO3BQ8WXR4 1341 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 QSER1Q2KHR3 1735 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 PLA2G4BP0C869 781 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 GFPT1Q06210 699 aaPredicted RBP12.1□□□□□ -0.47
LIN54-207ENST00000508171 C2orf54Q08AI8 447 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 CAGE1Q8TC20 777 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 COG1Q8WTW3 980 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 PSMB7Q99436 277 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 SH2D4AQ9H788 454 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 VPS18Q9P253 973 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 COL4A3BPQ9Y5P4 624 aa12.1□□□□□ -0.47
LIN54-207ENST00000508171 ANO9A1A5B4 782 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 USO1O60763 962 aaKnown RBP12.09□□□□□ -0.47
LIN54-207ENST00000508171 PHACTR2O75167 634 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 MED24O75448 989 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 NOL4O94818 638 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 LCA5LO95447 670 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
LIN54-207ENST00000508171 TAL1P17542 331 aaPredicted RBP12.09□□□□□ -0.47
LIN54-207ENST00000508171 SEPT2Q15019 361 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 CERKLQ49MI3 558 aaPredicted RBP12.09□□□□□ -0.47
LIN54-207ENST00000508171 HERC4Q5GLZ8 1057 aaPredicted RBP12.09□□□□□ -0.47
LIN54-207ENST00000508171 HYIQ5T013 277 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 CACNA2D4Q7Z3S7 1137 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 GPBP1Q86WP2 473 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 CREG2Q8IUH2 290 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 KCNMB3Q9NPA1 279 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
LIN54-207ENST00000508171 ABCB11O95342 1321 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 SIPA1L1O43166 1804 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 POTEFA5A3E0 1075 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 MEIS2O14770 477 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 POTEIP0CG38 1075 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 CXCR5P32302 372 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.47
LIN54-207ENST00000508171 HNRNPH2P55795 449 aaKnown RBP12.09□□□□□ -0.47
LIN54-207ENST00000508171 PSMC6P62333 389 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 CDC37Q16543 378 aaPredicted RBP12.09□□□□□ -0.47
LIN54-207ENST00000508171 CCDC40Q4G0X9 1142 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 ARSHQ5FYA8 562 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 HGSNATQ68CP4 663 aa12.09□□□□□ -0.47
LIN54-207ENST00000508171 SLFN13Q68D06 897 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms