RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MIGA2Q7L4E1 593 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
DDX41-208ENST00000507955 DNAJC7Q99615 494 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 ZCCHC17Q9NP64 241 aaKnown RBP16.13■□□□□ 0.17
DDX41-208ENST00000507955 A0A1W2PQC6 194 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 OPLAHO14841 1288 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 POLR3GO15318 223 aaPredicted RBP16.13■□□□□ 0.17
DDX41-208ENST00000507955 HERVK_113P62684 666 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 UBXN2AP68543 259 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 COASYQ13057 564 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 ORC2Q13416 577 aaPredicted RBP16.13■□□□□ 0.17
DDX41-208ENST00000507955 HDAC6Q9UBN7 1215 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 ARFGEF1Q9Y6D6 1849 aa16.13■□□□□ 0.17
DDX41-208ENST00000507955 ARHGAP4P98171 946 aa16.12■□□□□ 0.17
DDX41-208ENST00000507955 APBA1Q02410 837 aa16.12■□□□□ 0.17
DDX41-208ENST00000507955 TRIM14Q14142 442 aa16.12■□□□□ 0.17
DDX41-208ENST00000507955 KRT26Q7Z3Y9 468 aa16.12■□□□□ 0.17
DDX41-208ENST00000507955 DCAF4Q8WV16 495 aa16.12■□□□□ 0.17
DDX41-208ENST00000507955 ZNF277Q9NRM2 450 aaPredicted RBP16.12■□□□□ 0.17
DDX41-208ENST00000507955 SLC15A2Q16348 729 aa16.12■□□□□ 0.17
DDX41-208ENST00000507955 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
DDX41-208ENST00000507955 PANK4Q9NVE7 773 aa16.12■□□□□ 0.17
DDX41-208ENST00000507955 PVALEFA0A1B0GWK0 134 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 CYP2C19P33261 490 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 CYP4A11Q02928 519 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 NCAPH2Q6IBW4 605 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 FBXO11Q86XK2 927 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 CNKSR1Q969H4 720 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 AMNQ9BXJ7 453 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 LACRTQ9GZZ8 138 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 MMRN2Q9H8L6 949 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.11■□□□□ 0.17
DDX41-208ENST00000507955 KCNMB3Q9NPA1 279 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 PLA2G4BP0C869 781 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 BMP3P12645 472 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 EHHADHQ08426 723 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 SYDE2Q5VT97 1194 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 ZNF772Q68DY9 489 aaPredicted RBP16.11■□□□□ 0.17
DDX41-208ENST00000507955 GPBP1Q86WP2 473 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 SMCR8Q8TEV9 937 aaPredicted RBP16.11■□□□□ 0.17
DDX41-208ENST00000507955 RABGGTAQ92696 567 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 MRIQ9BWK5 157 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 NDST4Q9H3R1 872 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 NHEJ1Q9H9Q4 299 aaPredicted RBP16.11■□□□□ 0.17
DDX41-208ENST00000507955 VEZTQ9HBM0 779 aa16.11■□□□□ 0.17
DDX41-208ENST00000507955 RXRBP28702 533 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 HDLBPQ00341 1268 aaKnown RBP16.1■□□□□ 0.17
DDX41-208ENST00000507955 LRRC55Q6ZSA7 311 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 CATSPER3Q86XQ3 398 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 NOC3LQ8WTT2 800 aaKnown RBP16.1■□□□□ 0.17
DDX41-208ENST00000507955 FUT8Q9BYC5 575 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 CTAGE9A4FU28 777 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 PSMD14O00487 310 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 SRGAP2O75044 1071 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 PABPC4Q13310 644 aaKnown RBP eCLIP16.1■□□□□ 0.17
DDX41-208ENST00000507955 TSR1Q2NL82 804 aaKnown RBP16.1■□□□□ 0.17
DDX41-208ENST00000507955 VWA3BQ502W6 1294 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 ARSHQ5FYA8 562 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 CCDC174Q6PII3 467 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 GUF1Q8N442 669 aaKnown RBP16.1■□□□□ 0.17
DDX41-208ENST00000507955 GOLGA1Q92805 767 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 LENG9Q96B70 501 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 GLIS2Q9BZE0 524 aaPredicted RBP16.1■□□□□ 0.17
DDX41-208ENST00000507955 TANGO6Q9C0B7 1094 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.1■□□□□ 0.17
DDX41-208ENST00000507955 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
DDX41-208ENST00000507955 TRAF5O00463 557 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 CASP5P51878 434 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 HERC4Q5GLZ8 1057 aaPredicted RBP16.09■□□□□ 0.17
DDX41-208ENST00000507955 CC2D2BQ6DHV5 1058 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 TMEM39BQ9GZU3 492 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 ANKZF1Q9H8Y5 726 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 ZNF263O14978 683 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 OAS2P29728 719 aaKnown RBP16.09■□□□□ 0.17
DDX41-208ENST00000507955 SPIRE1Q08AE8 756 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 FAM26FQ5R3K3 315 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 CCDC122Q5T0U0 273 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 FAM83BQ5T0W9 1011 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 FAM114A1Q8IWE2 563 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 ETNPPLQ8TBG4 499 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 CRACR2AQ9BSW2 395 aa16.09■□□□□ 0.17
DDX41-208ENST00000507955 SHTN1A0MZ66 631 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 SPDYE3A6NKU9 549 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 ZBTB39O15060 712 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 CFBP00751 764 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 GCFC2P16383 781 aaKnown RBP16.08■□□□□ 0.17
DDX41-208ENST00000507955 CYP11B2P19099 503 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 USP11P51784 963 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 CHMP4BP1P59074 171 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 FKBP15Q5T1M5 1219 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 MYOCDQ8IZQ8 938 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 RGL1Q9NZL6 768 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 CDC23Q9UJX2 597 aa16.08■□□□□ 0.17
DDX41-208ENST00000507955 KRT18P05783 430 aaKnown RBP16.08■□□□□ 0.16
DDX41-208ENST00000507955 SRGAP1Q7Z6B7 1085 aa16.08■□□□□ 0.16
DDX41-208ENST00000507955 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
DDX41-208ENST00000507955 PNKPQ96T60 521 aa16.08■□□□□ 0.16
DDX41-208ENST00000507955 ARFGAP3Q9NP61 516 aa16.08■□□□□ 0.16
DDX41-208ENST00000507955 SIK3Q9Y2K2 1263 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms