RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 MTF1Q14872 753 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 NBPF9Q3BBW0 867 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 OR8K1Q8NGG5 319 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 ERO1AQ96HE7 468 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 CAPN11Q9UMQ6 739 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 LUC7L2Q9Y383 392 aaKnown RBP17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 MRPL11Q9Y3B7 192 aaKnown RBP17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 B4DLN1 442 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 RNF225M0QZC1 329 aaPredicted RBP17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 SSBP05455 408 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 RPA1P27694 616 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 POLD1P28340 1107 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 SPIRE1Q08AE8 756 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 TSR1Q2NL82 804 aaKnown RBP17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 CDAN1Q8IWY9 1227 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 KIFC2Q96AC6 838 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 TSG101Q99816 390 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 DESI2Q9BSY9 194 aa17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 NOC4LQ9BVI4 516 aaKnown RBP17.18■□□□□ 0.34
SNCAIP-207ENST00000504884 POTEB3A0JP26 581 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 POTECB2RU33 542 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 MED24O75448 989 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 STAT3P40763 770 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 COASYQ13057 564 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 POTEBQ6S5H4 581 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 CATSPER3Q86XQ3 398 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 KCTD17Q8N5Z5 321 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 UIMC1Q96RL1 719 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 ZNF215Q9UL58 517 aaPredicted RBP17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 ABCB11O95342 1321 aa17.17■□□□□ 0.34
SNCAIP-207ENST00000504884 PITPNM2Q9BZ72 1349 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 TTC26A0AVF1 554 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 MSH4O15457 936 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 CFBP00751 764 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 CASQ1P31415 396 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 GNG11P61952 73 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 NCBP1Q09161 790 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 FAM26FQ5R3K3 315 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 FKBP15Q5T1M5 1219 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 NCAPH2Q6IBW4 605 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 EEF2KMTQ96G04 330 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 EHMT1Q9H9B1 1298 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 DNM3Q9UQ16 869 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 KIF20AO95235 890 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 ZBTB7AO95365 584 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 CYP11B2P19099 503 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 RPS12P25398 132 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 SLC12A3P55017 1021 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 TNFAIP1Q13829 316 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 RASA3Q14644 834 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 MIIPQ5JXC2 388 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 GPBP1Q86WP2 473 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 IQCDQ96DY2 449 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 ERGIC2Q96RQ1 377 aa17.16■□□□□ 0.34
SNCAIP-207ENST00000504884 TAL1P17542 331 aaPredicted RBP17.15■□□□□ 0.34
SNCAIP-207ENST00000504884 ERVK-24P63145 666 aa17.15■□□□□ 0.34
SNCAIP-207ENST00000504884 ZYXQ15942 572 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-207ENST00000504884 DNAJC7Q99615 494 aa17.15■□□□□ 0.34
SNCAIP-207ENST00000504884 MRPL44Q9H9J2 332 aaKnown RBP17.15■□□□□ 0.34
SNCAIP-207ENST00000504884 GINM1Q9NU53 330 aa17.15■□□□□ 0.34
SNCAIP-207ENST00000504884 PHF20L1A8MW92 1017 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 SPATA31C1P0DKV0 1188 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 LRRC41Q15345 812 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 VWA3BQ502W6 1294 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 FIGNQ5HY92 759 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 SYT2Q8N9I0 419 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 POLR3CQ9BUI4 534 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 IGLV3-22A0A075B6J6 115 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 POTEFA5A3E0 1075 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 URI1O94763 535 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 KRT18P05783 430 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 POTEIP0CG38 1075 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 TRIM21P19474 475 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 FKBP3Q00688 224 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 MAN2A1Q16706 1144 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 KIF4BQ2VIQ3 1234 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 ARSHQ5FYA8 562 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 POTEGQ6S5H5 508 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 POTEEQ6S8J3 1075 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 LDHDQ86WU2 507 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 CYP2W1Q8TAV3 490 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 MTFR1LQ9H019 292 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 DEFB129Q9H1M3 183 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 VAV3Q9UKW4 847 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 PCDHA2Q9Y5H9 948 aa17.14■□□□□ 0.33
SNCAIP-207ENST00000504884 FRMD3A2A2Y4 597 aa17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 PTGER2P43116 358 aa17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 CCDC125Q86Z20 511 aa17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 ZNF397Q8NF99 534 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 FEZ1Q99689 392 aa17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-207ENST00000504884 TTYH3Q9C0H2 523 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms