RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 RHOT2Q8IXI1 618 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ESR2Q92731 530 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 DGCR14Q96DF8 476 aaKnown RBP6.58□□□□□ -1.36
LINC02397-201ENST00000504409 ATP10BO94823 1461 aa6.58□□□□□ -1.36
LINC02397-201ENST00000504409 PNMA8CA0A1B0GUJ8 204 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 GARSP41250 739 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 POLE2P56282 527 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 STK3Q13188 491 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 PEX26Q7Z412 305 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 RIC3Q7Z5B4 369 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 MRC2Q9UBG0 1479 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 PHACTR2O75167 634 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 ZNF12P17014 697 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 FCHO2Q0JRZ9 810 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 SNX17Q15036 470 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 RINLQ6ZS11 566 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 APOL4Q9BPW4 351 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 MRPL11Q9Y3B7 192 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 VWA5AO00534 786 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 IGHDP01880 384 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 S100ZQ8WXG8 99 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 CDKL2Q92772 493 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 XPO4Q9C0E2 1151 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 KCNK9Q9NPC2 374 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 ZNF521Q96K83 1311 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 H0Y626 953 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 PSMD14O00487 310 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 TRIM16O95361 564 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 HSPA1AP0DMV8 641 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 HSPA1BP0DMV9 641 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 LMOD1P29536 600 aaPredicted RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 ZBED6P86452 979 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 TRMT5Q32P41 509 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 TRIML2Q8N7C3 387 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 SUCLA2Q9P2R7 463 aaPredicted RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 PUF60Q9UHX1 559 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 GNAT3A8MTJ3 354 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 ZBTB43O43298 467 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 GPTP24298 496 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 CCDC105Q8IYK2 499 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 KRT37O76014 449 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 MDH1P40925 334 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 KLHL38Q2WGJ6 581 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 CMPK2Q5EBM0 449 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 TSHZ1Q6ZSZ6 1077 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 DIS3LQ8TF46 1054 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 PPP1R2P1Q96PQ5 205 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 FBXO28Q9NVF7 368 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 SMARCAL1Q9NZC9 954 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 KDRP35968 1356 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 FANCAO15360 1455 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 BRF1Q92994 677 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 CAVIN3Q969G5 261 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 FRMD8P1Q9BZ68 369 aaPredicted RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 ZC3H11AO75152 810 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 LONP1P36776 959 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 SCRN3Q0VDG4 424 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 TUBGCP3Q96CW5 907 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 EXOC7Q9UPT5 735 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 PFDN6O15212 129 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 DKC1O60832 514 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 ABCB4P21439 1286 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 RBM5P52756 815 aaKnown RBP eCLIP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 HK2P52789 917 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 RAB14P61106 215 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 RFWD2Q8NHY2 731 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 NAPBQ9H115 298 aa6.57□□□□□ -1.36
LINC02397-201ENST00000504409 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.57□□□□□ -1.36
LINC02397-201ENST00000504409 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 CDH2P19022 906 aaPredicted RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 CCDC15Q0P6D6 951 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 ASIC2Q16515 512 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 POLR3CQ9BUI4 534 aaPredicted RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 TAF1DQ9H5J8 278 aaPredicted RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 SPC25Q9HBM1 224 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 FAM8A1Q9UBU6 413 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 ADAMTS12P58397 1594 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 BAG3O95817 575 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 MARK3P27448 753 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 RAB25P57735 213 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 BPIFB4P59827 614 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 GSTO1P78417 241 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 ARL6IP4Q66PJ3 421 aaKnown RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 KIAA1841Q6NSI8 718 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 RBBP8NLQ8NC74 664 aaPredicted RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 KDM6AO15550 1401 aaPredicted RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 FCGR1AP12314 374 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 KRT76Q01546 638 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 MTA1Q13330 715 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 CEP55Q53EZ4 464 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 CYB5D1Q6P9G0 228 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 XKRXQ6PP77 449 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 PRUNE1Q86TP1 453 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 SYN2Q92777 582 aaPredicted RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 ZKSCAN3Q9BRR0 538 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 CCPG1Q9ULG6 757 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 WBP11Q9Y2W2 641 aaKnown RBP6.56□□□□□ -1.36
LINC02397-201ENST00000504409 KRT14P02533 472 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 HMOX2P30519 316 aa6.56□□□□□ -1.36
LINC02397-201ENST00000504409 HNRNPH1P31943 449 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms