RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 CATSPER3Q86XQ3 398 aa10.1□□□□□ -0.79
LINC02239-201ENST00000504339 CDK5RAP3Q96JB5 506 aa10.1□□□□□ -0.79
LINC02239-201ENST00000504339 CHP1Q99653 195 aa10.1□□□□□ -0.79
LINC02239-201ENST00000504339 TUBGCP2Q9BSJ2 902 aa10.1□□□□□ -0.79
LINC02239-201ENST00000504339 PIM2Q9P1W9 311 aa10.1□□□□□ -0.79
LINC02239-201ENST00000504339 VAV3Q9UKW4 847 aa10.1□□□□□ -0.79
LINC02239-201ENST00000504339 A0A1W2PQC6 194 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 POTEFA5A3E0 1075 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 SPDYE4A6NLX3 237 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 MSH4O15457 936 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 POTEIP0CG38 1075 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 CYP11B2P19099 503 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 ZCWPW2Q504Y3 356 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 WDR59Q6PJI9 974 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 POTEGQ6S5H5 508 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 LRRC55Q6ZSA7 311 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 CNGA4Q8IV77 575 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 GUF1Q8N442 669 aaKnown RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 CNOT6LQ96LI5 555 aaKnown RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 WDR18Q9BV38 432 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 RANBP17Q9H2T7 1088 aaKnown RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 BCAS3Q9H6U6 928 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 VCPKMTQ9H867 229 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 ARHGEF10LQ9HCE6 1279 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 MYOZ2Q9NPC6 264 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 PHLPP2Q6ZVD8 1323 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 EML1O00423 815 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 ZSCAN12O43309 604 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 CYP3A4P08684 503 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 PLA2G4BP0C869 781 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 IDEP14735 1019 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 KRT9P35527 623 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 TGFB2P61812 414 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 CACNB1Q02641 598 aaPredicted RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 COASYQ13057 564 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 DGKZQ13574 1117 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 UTP14CQ5TAP6 766 aaKnown RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 NOC3LQ8WTT2 800 aaKnown RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 CCDC51Q96ER9 411 aa10.09□□□□□ -0.79
LINC02239-201ENST00000504339 NAP1L4Q99733 375 aaKnown RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 NAA15Q9BXJ9 866 aaKnown RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 REXO2Q9Y3B8 237 aaKnown RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 V9GYY5 206 aaPredicted RBP10.09□□□□□ -0.79
LINC02239-201ENST00000504339 BICDL2A1A5D9 508 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 CCP110O43303 1012 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 MARCH6O60337 910 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 FOSP01100 380 aaPredicted RBP10.08□□□□□ -0.8
LINC02239-201ENST00000504339 POLD1P28340 1107 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 INPP5BP32019 993 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 ZNF280AP59817 542 aaPredicted RBP10.08□□□□□ -0.8
LINC02239-201ENST00000504339 SF3B2Q13435 895 aaKnown RBP10.08□□□□□ -0.8
LINC02239-201ENST00000504339 RASA3Q14644 834 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 CCDC174Q6PII3 467 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 SLFN12Q8IYM2 578 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 ACRBPQ8NEB7 543 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 AGPAT5Q9NUQ2 364 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 ZNF536O15090 1300 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 FRMD3A2A2Y4 597 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 SPDYE3A6NKU9 549 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 MEIS1O00470 390 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 TBX3O15119 743 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 EPHB6O15197 1021 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 CIAPIN1Q6FI81 312 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 ANKRD20A12PQ8NF67 263 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 ZFP91Q96JP5 570 aaPredicted RBP10.08□□□□□ -0.8
LINC02239-201ENST00000504339 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 CAPN11Q9UMQ6 739 aa10.08□□□□□ -0.8
LINC02239-201ENST00000504339 PLA2G6O60733 806 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 CFBP00751 764 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 TUBB4AP04350 444 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 RPA1P27694 616 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 PPP1R2P41236 205 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 ARHGAP25P42331 645 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 PTGER2P43116 358 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 DNM2P50570 870 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 RAD51AP2Q09MP3 1159 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 KIF4BQ2VIQ3 1234 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 DALRD3Q5D0E6 543 aaKnown RBP10.07□□□□□ -0.8
LINC02239-201ENST00000504339 CCDC47Q96A33 483 aaKnown RBP10.07□□□□□ -0.8
LINC02239-201ENST00000504339 NT5C3AQ9H0P0 336 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 TAOK3Q9H2K8 898 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 PANK4Q9NVE7 773 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 TBC1D7Q9P0N9 293 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 KDM3AQ9Y4C1 1321 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 SLU7O95391 586 aaKnown RBP10.07□□□□□ -0.8
LINC02239-201ENST00000504339 SSBP05455 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
LINC02239-201ENST00000504339 CCDC175P0C221 793 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 ERCC3P19447 782 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 CASP5P51878 434 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 GNG11P61952 73 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 UBXN2AP68543 259 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 TBC1D8BQ0IIM8 1120 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 PSMD2Q13200 908 aa10.07□□□□□ -0.8
LINC02239-201ENST00000504339 MCTP2Q6DN12 878 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms