RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 LZTFL1Q9NQ48 299 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 CAPN11Q9UMQ6 739 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 KIF13BQ9NQT8 1826 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 ACRBPQ8NEB7 543 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 KIFC2Q96AC6 838 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 IRX2Q9BZI1 471 aaPredicted RBP25.04■■□□□ 1.6
PCDH1-204ENST00000503492 PANK4Q9NVE7 773 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 LUC7L2Q9Y383 392 aaKnown RBP25.04■■□□□ 1.6
PCDH1-204ENST00000503492 RASSF10A6NK89 507 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 PIK3CDO00329 1044 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 HOXA7P31268 230 aaPredicted RBP25.04■■□□□ 1.6
PCDH1-204ENST00000503492 CIITAP33076 1130 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 FAM83AQ86UY5 434 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 OR8K1Q8NGG5 319 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 ZBED3Q96IU2 234 aaPredicted RBP25.04■■□□□ 1.6
PCDH1-204ENST00000503492 CHP1Q99653 195 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 PGAP2Q9UHJ9 254 aa25.04■■□□□ 1.6
PCDH1-204ENST00000503492 KLK7P49862 253 aa25.03■■□□□ 1.6
PCDH1-204ENST00000503492 DNAJC7Q99615 494 aa25.03■■□□□ 1.6
PCDH1-204ENST00000503492 TTYH3Q9C0H2 523 aa25.03■■□□□ 1.6
PCDH1-204ENST00000503492 LRRC63Q05C16 580 aa25.03■■□□□ 1.6
PCDH1-204ENST00000503492 VCPKMTQ9H867 229 aa25.03■■□□□ 1.6
PCDH1-204ENST00000503492 BMP2KQ9NSY1 1161 aaPredicted RBP25.03■■□□□ 1.6
PCDH1-204ENST00000503492 ELF2Q15723 593 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 ZYXQ15942 572 aaKnown RBP25.02■■□□□ 1.6
PCDH1-204ENST00000503492 NBPF9Q3BBW0 867 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 CATSPER3Q86XQ3 398 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 CYP2W1Q8TAV3 490 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 TBC1D5Q92609 795 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 NPHP3-ACAD11A0A0J9YXS1 232 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 POTEFA5A3E0 1075 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 MSH4O15457 936 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 CYP3A4P08684 503 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 POTEIP0CG38 1075 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 CYP11B2P19099 503 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 CAP2P40123 477 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 FAM26FQ5R3K3 315 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 NCAPH2Q6IBW4 605 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 CCDC174Q6PII3 467 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 POTEGQ6S5H5 508 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 POTEEQ6S8J3 1075 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 GPBP1Q86WP2 473 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 FAM20AQ96MK3 541 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 ARID3AQ99856 593 aa25.02■■□□□ 1.6
PCDH1-204ENST00000503492 WNT10BO00744 389 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 HAUS3Q68CZ6 603 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 MYOCDQ8IZQ8 938 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 RANBP17Q9H2T7 1088 aaKnown RBP25.01■■□□□ 1.59
PCDH1-204ENST00000503492 SHTN1A0MZ66 631 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 SLC12A3P55017 1021 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 CACNB1Q02641 598 aaPredicted RBP25.01■■□□□ 1.59
PCDH1-204ENST00000503492 WDR59Q6PJI9 974 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 LRRC55Q6ZSA7 311 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 ERGIC2Q96RQ1 377 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 FGFBP2Q9BYJ0 223 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 GLIS2Q9BZE0 524 aaPredicted RBP25.01■■□□□ 1.59
PCDH1-204ENST00000503492 AGPAT5Q9NUQ2 364 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 PIM2Q9P1W9 311 aa25.01■■□□□ 1.59
PCDH1-204ENST00000503492 SPATA31C1P0DKV0 1188 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 CHURC1Q8WUH1 139 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 NUP58Q9BVL2 599 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 PCDHA2Q9Y5H9 948 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 CFBP00751 764 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 ARSHQ5FYA8 562 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 FOXR2Q6PJQ5 311 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 CCDC84Q86UT8 332 aaPredicted RBP25■■□□□ 1.59
PCDH1-204ENST00000503492 CCDC65Q8IXS2 484 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 SLF1Q9BQI6 1058 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 TBC1D7Q9P0N9 293 aa25■■□□□ 1.59
PCDH1-204ENST00000503492 CGNQ9P2M7 1197 aaKnown RBP25■■□□□ 1.59
PCDH1-204ENST00000503492 FGFR1OPO95684 399 aaKnown RBP24.99■■□□□ 1.59
PCDH1-204ENST00000503492 TRIM21P19474 475 aaKnown RBP24.99■■□□□ 1.59
PCDH1-204ENST00000503492 PSMC6P62333 389 aa24.99■■□□□ 1.59
PCDH1-204ENST00000503492 MAP3K9P80192 1104 aa24.99■■□□□ 1.59
PCDH1-204ENST00000503492 TRAF1Q13077 416 aa24.99■■□□□ 1.59
PCDH1-204ENST00000503492 ERCC6LQ2NKX8 1250 aa24.99■■□□□ 1.59
PCDH1-204ENST00000503492 ZCWPW2Q504Y3 356 aa24.99■■□□□ 1.59
PCDH1-204ENST00000503492 RETREG2Q8NC44 543 aa24.99■■□□□ 1.59
PCDH1-204ENST00000503492 ERMNQ8TAM6 284 aa24.99■■□□□ 1.59
PCDH1-204ENST00000503492 VAV3Q9UKW4 847 aa24.99■■□□□ 1.59
PCDH1-204ENST00000503492 IGLV3-22A0A075B6J6 115 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 RPA1P27694 616 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 ZNF76P36508 570 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 VWA3BQ502W6 1294 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 FKBP15Q5T1M5 1219 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 TSG101Q99816 390 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 SCAF8Q9UPN6 1271 aaKnown RBP24.98■■□□□ 1.59
PCDH1-204ENST00000503492 EPN1Q9Y6I3 576 aaPredicted RBP24.98■■□□□ 1.59
PCDH1-204ENST00000503492 ABL1P00519 1130 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 MAP3K10Q02779 954 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 RAD51AP2Q09MP3 1159 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 CIAPIN1Q6FI81 312 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 ABCB11O95342 1321 aa24.98■■□□□ 1.59
PCDH1-204ENST00000503492 MEIS1O00470 390 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 PLA2G6O60733 806 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 NDUFA10O95299 355 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 PCMTD1Q96MG8 357 aaPredicted RBP24.97■■□□□ 1.59
PCDH1-204ENST00000503492 CCDC94Q9BW85 323 aaPredicted RBP24.97■■□□□ 1.59
PCDH1-204ENST00000503492 CARD6Q9BX69 1037 aa24.97■■□□□ 1.59
PCDH1-204ENST00000503492 NDST4Q9H3R1 872 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms