RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CTNNA3Q9UI47 895 aa10.7□□□□□ -0.7
CCDC171-209ENST00000498725 POTEB3A0JP26 581 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 RSPH10B2B2RC85 870 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 ORC4O43929 436 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 DHX16O60231 1041 aaKnown RBP10.69□□□□□ -0.7
CCDC171-209ENST00000498725 CTSHP09668 335 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 RSPH10BP0C881 870 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 MYCLP12524 364 aaPredicted RBP10.69□□□□□ -0.7
CCDC171-209ENST00000498725 RBL2Q08999 1139 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 TRIM71Q2Q1W2 868 aaKnown RBP10.69□□□□□ -0.7
CCDC171-209ENST00000498725 TIGD5Q53EQ6 642 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 ARHGEF16Q5VV41 709 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 POTEBQ6S5H4 581 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 RPAINQ86UA6 219 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 TMEM192Q8IY95 271 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 PI4K2BQ8TCG2 481 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 PABPC5Q96DU9 382 aaKnown RBP10.69□□□□□ -0.7
CCDC171-209ENST00000498725 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
CCDC171-209ENST00000498725 RMDN3Q96TC7 470 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 KATNAL1Q9BW62 490 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 OSBPL7Q9BZF2 842 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 IGFLR1Q9H665 355 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 MUTYHQ9UIF7 546 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 FAM50BQ9Y247 325 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 MRVI1Q9Y6F6 885 aa10.69□□□□□ -0.7
CCDC171-209ENST00000498725 KIAA1671Q9BY89 1806 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 WDFY4Q6ZS81 3184 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 WDR19Q8NEZ3 1342 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 H3BNC9 293 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 NOVP48745 357 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 HTRA4P83105 476 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-209ENST00000498725 CDC37Q16543 378 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-209ENST00000498725 ADHFE1Q8IWW8 467 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 SYTL5Q8TDW5 730 aaPredicted RBP10.68□□□□□ -0.7
CCDC171-209ENST00000498725 NSUN6Q8TEA1 469 aaKnown RBP10.68□□□□□ -0.7
CCDC171-209ENST00000498725 SNX27Q96L92 541 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
CCDC171-209ENST00000498725 DCTPP1Q9H773 170 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 VAT1LQ9HCJ6 419 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 DDX41Q9UJV9 622 aaKnown RBP10.68□□□□□ -0.7
CCDC171-209ENST00000498725 ANAPC4Q9UJX5 808 aa10.68□□□□□ -0.7
CCDC171-209ENST00000498725 C5orf42Q9H799 3197 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 ABCB11O95342 1321 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 TTC41PQ6P2S7 1318 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 EMSYQ7Z589 1322 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 HAS3O00219 553 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 F2P00734 622 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 CFBP00751 764 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 FGAP02671 866 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 CTNNB1P35222 781 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 GTF2F1P35269 517 aaKnown RBP eCLIP10.67□□□□□ -0.7
CCDC171-209ENST00000498725 DLX2Q07687 328 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-209ENST00000498725 LAMC2Q13753 1193 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 FBXO11Q86XK2 927 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 ATP6V0A1Q93050 837 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 MFSD14AQ96MC6 490 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 SAMD11Q96NU1 681 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 IFIH1Q9BYX4 1025 aaKnown RBP10.67□□□□□ -0.7
CCDC171-209ENST00000498725 UPF3BQ9BZI7 483 aaKnown RBP10.67□□□□□ -0.7
CCDC171-209ENST00000498725 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
CCDC171-209ENST00000498725 KMT2EQ8IZD2 1858 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 C17orf102A2RUQ5 167 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 LINC01565O15544 149 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 GGPS1O95749 300 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 NR3C2P08235 984 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 LTBRP36941 435 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 HSDL1Q3SXM5 330 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 PLEKHG4Q58EX7 1191 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 RNF135Q8IUD6 432 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 ADGRF4Q8IZF3 695 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 RGS22Q8NE09 1264 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 PRSS33Q8NF86 280 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 PPTC7Q8NI37 304 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 SEPT8Q92599 483 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 SPATA33Q96N06 139 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 IWS1Q96ST2 819 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 PXMP2Q9NR77 195 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 TCP11L1Q9NUJ3 509 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 KAT6AQ92794 2004 aa10.66□□□□□ -0.7
CCDC171-209ENST00000498725 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.65□□□□□ -0.7
CCDC171-209ENST00000498725 STXBP3O00186 592 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 GRM6O15303 877 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 TREHO43280 583 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 MBTPS2O43462 519 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 EIF3JO75822 258 aaKnown RBP10.65□□□□□ -0.7
CCDC171-209ENST00000498725 FGRP09769 529 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 MX1P20591 662 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 HYAL1Q12794 435 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 QRICH1Q2TAL8 776 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 GPATCH4Q5T3I0 446 aaKnown RBP10.65□□□□□ -0.7
CCDC171-209ENST00000498725 IER5LQ5T953 404 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 MFSD6Q6ZSS7 791 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 SERINC5Q86VE9 423 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 MCF2L2Q86YR7 1114 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 FIBCD1Q8N539 461 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 GPKOWQ92917 476 aaPredicted RBP eCLIP10.65□□□□□ -0.7
CCDC171-209ENST00000498725 TOP1MTQ969P6 601 aa10.65□□□□□ -0.7
CCDC171-209ENST00000498725 KCNH6Q9H252 994 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms