RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 CLASRPQ8N2M8 674 aaKnown RBP6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 KBTBD3Q8NAB2 608 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 PANK1Q8TE04 598 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 ARNTL2Q8WYA1 636 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 APPBP2Q92624 585 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 KAT2BQ92831 832 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 WNT8BQ93098 351 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 SUGCTQ9HAC7 445 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 IL17RBQ9NRM6 502 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 HOMER2Q9NSB8 354 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 CLIP2Q9UDT6 1046 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 LIMD1Q9UGP4 676 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 PRR12Q9ULL5 1215 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 DMXL1Q9Y485 3027 aa6.66□□□□□ -1.34
CSNK1E-214ENST00000498529 ZBBXA8MT70 800 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 TMEM232C9JQI7 657 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 GPAA1O43292 621 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 RAD21O60216 631 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 PRDM1O75626 825 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 GJB5O95377 273 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 ICAM1P05362 532 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 FGRP09769 529 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 HOXC8P31273 242 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 RFC5P40937 340 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 MRE11P49959 708 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 HTRA4P83105 476 aaPredicted RBP6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 ZP2Q05996 745 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 SLFN13Q68D06 897 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 DEFB128Q7Z7B8 93 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 ALYREFQ86V81 257 aaKnown RBP6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 LAPTM4BQ86VI4 370 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 AFAP1L1Q8TED9 768 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 PPP1R13LQ8WUF5 828 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 STAG1Q8WVM7 1258 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 ANKS1AQ92625 1134 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 SNX27Q96L92 541 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 TRERF1Q96PN7 1200 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 MTG1Q9BT17 334 aaPredicted RBP6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 KCNH6Q9H252 994 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 RC3H2Q9HBD1 1191 aaKnown RBP6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 KIAA1468Q9P260 1216 aa6.65□□□□□ -1.34
CSNK1E-214ENST00000498529 SALL3Q9BXA9 1300 aa6.65□□□□□ -1.35
CSNK1E-214ENST00000498529 MYO10Q9HD67 2058 aa6.65□□□□□ -1.35
CSNK1E-214ENST00000498529 TK2O00142 265 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 SMAPO00193 183 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 HAS3O00219 553 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 LILRB3O75022 631 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 RAB11FIP3O75154 756 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 SUPT20HL2P0C7V6 817 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 SNHG28P0DPA3 235 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 GCGRP47871 477 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 SNAP25P60880 206 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 ARHGAP1Q07960 439 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 LRRFIP1Q32MZ4 808 aaKnown RBP6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 TMEM259Q4ZIN3 620 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 GDF6Q6KF10 455 aaPredicted RBP6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 EEPD1Q7L9B9 569 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 CAGE1Q8TC20 777 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 COPS5Q92905 334 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 FBXL18Q96ME1 805 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 WDR11Q9BZH6 1224 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 AP5M1Q9H0R1 490 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 COG6Q9Y2V7 657 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 WDR19Q8NEZ3 1342 aa6.64□□□□□ -1.35
CSNK1E-214ENST00000498529 KMT2BQ9UMN6 2715 aaPredicted RBP6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 BHMG1C9JSJ3 638 aaPredicted RBP6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 NKRFO15226 690 aaKnown RBP eCLIP6.63□□□□□ -1.357e-9■■■□□ 16.7
CSNK1E-214ENST00000498529 ZEB2O60315 1214 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 NMT2O60551 498 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 LGR5O75473 907 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 F2P00734 622 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 MMP3P08254 477 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 IFIT2P09913 472 aaKnown RBP6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 ACTN1P12814 892 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 ALAS1P13196 640 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 LTBRP36941 435 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 PSEN2P49810 448 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 CPT1AP50416 773 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 GHRHRQ02643 423 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 BAATQ14032 418 aaPredicted RBP6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 CTC1Q2NKJ3 1217 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 C2orf16Q68DN1 1984 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 TTBK2Q6IQ55 1244 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 RCSD1Q6JBY9 416 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 CNKSR3Q6P9H4 555 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 KIAA1211Q6ZU35 1233 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 KCTD1Q719H9 257 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 LRRC8DQ7L1W4 858 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 AMOTL1Q8IY63 956 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 FTSJ3Q8IY81 847 aaKnown RBP6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 IFNL3Q8IZI9 196 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 GJD3Q8N144 294 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 PI4K2BQ8TCG2 481 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 VTI1AQ96AJ9 217 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 POM121Q96HA1 1249 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 OSBPL7Q9BZF2 842 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 GTF2IRD1Q9UHL9 959 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 ANAPC4Q9UJX5 808 aa6.63□□□□□ -1.35
CSNK1E-214ENST00000498529 VPS9D1Q9Y2B5 631 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms