RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 LRRC55Q6ZSA7 311 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 CCDC84Q86UT8 332 aaPredicted RBP17.04■□□□□ 0.32
CALD1-222ENST00000495522 JAKMIP2Q96AA8 810 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 MBOAT7Q96N66 472 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 PANK4Q9NVE7 773 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 CTAGE15A4D2H0 777 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 CTAGE8P0CG41 777 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 PLA2G4AP47712 749 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 MCTP2Q6DN12 878 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 CTAGE6Q86UF2 777 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 CTAGE4Q8IX94 777 aa17.04■□□□□ 0.32
CALD1-222ENST00000495522 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 H0YIN7 160 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 TBC1D8O95759 1140 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 HNRNPH3P31942 346 aaKnown RBP17.03■□□□□ 0.32
CALD1-222ENST00000495522 LRRC41Q15345 812 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 FAM26FQ5R3K3 315 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 SIAH1Q8IUQ4 282 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 SLFN12Q8IYM2 578 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 MSANTD4Q8NCY6 345 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 GMCL1P1Q8NEA9 526 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 ANKZF1Q9H8Y5 726 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 KIAA1024Q9UPX6 916 aa17.03■□□□□ 0.32
CALD1-222ENST00000495522 ZNF646O15015 1829 aaPredicted RBP17.02■□□□□ 0.32
CALD1-222ENST00000495522 MEIS2O14770 477 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 SSBP05455 408 aaKnown RBP eCLIP17.02■□□□□ 0.32
CALD1-222ENST00000495522 ABCB5Q2M3G0 1257 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 TAF3Q5VWG9 929 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 TRAPPC11Q7Z392 1133 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 CCDC65Q8IXS2 484 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 GLIS3Q8NEA6 775 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 AMNQ9BXJ7 453 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 ZHX1Q9UKY1 873 aaPredicted RBP17.02■□□□□ 0.32
CALD1-222ENST00000495522 PLAGL2Q9UPG8 496 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 RGPD3A6NKT7 1758 aaPredicted RBP17.02■□□□□ 0.32
CALD1-222ENST00000495522 RGPD4Q7Z3J3 1758 aa17.02■□□□□ 0.32
CALD1-222ENST00000495522 F5H6K3 240 aa17.02■□□□□ 0.31
CALD1-222ENST00000495522 PLA2G4BP0C869 781 aa17.02■□□□□ 0.31
CALD1-222ENST00000495522 KLRC3Q07444 240 aa17.02■□□□□ 0.31
CALD1-222ENST00000495522 ZCWPW2Q504Y3 356 aa17.02■□□□□ 0.31
CALD1-222ENST00000495522 GMCL1Q96IK5 515 aa17.02■□□□□ 0.31
CALD1-222ENST00000495522 CCDC42Q96M95 316 aa17.02■□□□□ 0.31
CALD1-222ENST00000495522 RAB21Q9UL25 225 aa17.02■□□□□ 0.31
CALD1-222ENST00000495522 POTEB3A0JP26 581 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 POTECB2RU33 542 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 E9PMD0 336 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 GDF11O95390 407 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 TFRCP02786 760 aaKnown RBP17.01■□□□□ 0.31
CALD1-222ENST00000495522 ARHGAP4P98171 946 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 FKBP3Q00688 224 aaKnown RBP17.01■□□□□ 0.31
CALD1-222ENST00000495522 TERF2Q15554 542 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 POTEBQ6S5H4 581 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 CRYGNQ8WXF5 182 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 TSGA10Q9BZW7 698 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 FAM207AQ9NSI2 230 aaPredicted RBP17.01■□□□□ 0.31
CALD1-222ENST00000495522 TFR2Q9UP52 801 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 SASH3O75995 380 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 VAV2P52735 878 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 SPA17Q15506 151 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 HAUS3Q68CZ6 603 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 FBXO11Q86XK2 927 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 HNRNPLLQ8WVV9 542 aaKnown RBP17.01■□□□□ 0.31
CALD1-222ENST00000495522 LACRTQ9GZZ8 138 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 ST7Q9NRC1 585 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 COL4A3BPQ9Y5P4 624 aa17.01■□□□□ 0.31
CALD1-222ENST00000495522 ATRNL1Q5VV63 1379 aa17■□□□□ 0.31
CALD1-222ENST00000495522 SLX4Q8IY92 1834 aa17■□□□□ 0.31
CALD1-222ENST00000495522 RCCD1A6NED2 376 aa17■□□□□ 0.31
CALD1-222ENST00000495522 ENTPD3O75355 529 aa17■□□□□ 0.31
CALD1-222ENST00000495522 NDUFB10O96000 172 aa17■□□□□ 0.31
CALD1-222ENST00000495522 LONRF2Q1L5Z9 754 aa17■□□□□ 0.31
CALD1-222ENST00000495522 SYDE2Q5VT97 1194 aa17■□□□□ 0.31
CALD1-222ENST00000495522 PAPD7Q5XG87 772 aaKnown RBP17■□□□□ 0.31
CALD1-222ENST00000495522 CEP63Q96MT8 703 aa17■□□□□ 0.31
CALD1-222ENST00000495522 PURBQ96QR8 312 aaKnown RBP17■□□□□ 0.31
CALD1-222ENST00000495522 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
CALD1-222ENST00000495522 TRAF5O00463 557 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 TBX3O15119 743 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 EPHB6O15197 1021 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 FOSP01100 380 aaPredicted RBP16.99■□□□□ 0.31
CALD1-222ENST00000495522 FAM193AP78312 1265 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 EN1Q05925 392 aaPredicted RBP16.99■□□□□ 0.31
CALD1-222ENST00000495522 KIF5AQ12840 1032 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
CALD1-222ENST00000495522 Q4G0T1 1027 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 ETNPPLQ8TBG4 499 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 UIMC1Q96RL1 719 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 FUT8Q9BYC5 575 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 EDEM3Q9BZQ6 932 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 PCDHA2Q9Y5H9 948 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 SAR1BQ9Y6B6 198 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 ENC1O14682 589 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 MED24O75448 989 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 ERLIN1O75477 346 aa16.99■□□□□ 0.31
CALD1-222ENST00000495522 ATP1A1P05023 1023 aaKnown RBP16.99■□□□□ 0.31
CALD1-222ENST00000495522 TUBBP07437 444 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms