RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-240	ENST00000495293	RGS17	Q9UGC6	210 aa	Predicted RBP	6.11	□□□□□ -1.43
RBM39-240	ENST00000495293	IRAK3	Q9Y616	596 aa		6.11	□□□□□ -1.43
RBM39-240	ENST00000495293	USP6	P35125	1406 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	TTC21B	Q7Z4L5	1316 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	OTOL1	A6NHN0	477 aa	Predicted RBP	6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	VAV1	P15498	845 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	MCM4	P33991	863 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	BMP8B	P34820	402 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	AFF3	P51826	1226 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	NCKAP1L	P55160	1127 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	EVA1C	P58658	441 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	AUH	Q13825	339 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	C9orf131	Q5VYM1	1079 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	FAM129C	Q86XR2	697 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	KIAA0825	Q8IV33	1275 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	UNC5CL	Q8IV45	518 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	SYT8	Q8NBV8	401 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	FEZF2	Q8TBJ5	459 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	MZB1	Q8WU39	189 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	RELT	Q969Z4	430 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	MRRF	Q96E11	262 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	TESK2	Q96S53	571 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	SPON2	Q9BUD6	331 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	SIRT5	Q9NXA8	310 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	HCFC2	Q9Y5Z7	792 aa		6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	TRPM3	Q9HCF6	1732 aa	Predicted RBP	6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	MARF1	Q9Y4F3	1742 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-240	ENST00000495293	FAM83G	A6ND36	823 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	NUDT19	A8MXV4	375 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	FOXD2	O60548	495 aa	Predicted RBP	6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	GC	P02774	474 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	HSPA5	P11021	654 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	PRKCA	P17252	672 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	CCNF	P41002	786 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	ZC3H6	P61129	1189 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	RAD51AP2	Q09MP3	1159 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	TDRD10	Q5VZ19	366 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	TMC6	Q7Z403	805 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	LDHD	Q86WU2	507 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	TP53I13	Q8NBR0	393 aa	Predicted RBP	6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	CDADC1	Q9BWV3	514 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	BTG4	Q9NY30	223 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	IMPACT	Q9P2X3	320 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	ACSL6	Q9UKU0	697 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	PCDHB12	Q9Y5F1	795 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	PCDHA5	Q9Y5H7	936 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	ALS2	Q96Q42	1657 aa		6.09	□□□□□ -1.43
RBM39-240	ENST00000495293	RFXAP	O00287	272 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	ZYX	Q15942	572 aa	Known RBP	6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	GALNT18	Q6P9A2	607 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	RPTN	Q6XPR3	784 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	METTL16	Q86W50	562 aa	Known RBP	6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	NUP43	Q8NFH3	380 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	NKD1	Q969G9	470 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	COG3	Q96JB2	828 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	NT5C1A	Q9BXI3	368 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	SLC12A9	Q9BXP2	914 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	BCL11A	Q9H165	835 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	RTEL1	Q9NZ71	1219 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	SUCO	Q9UBS9	1254 aa	Known RBP	6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	TAF6L	Q9Y6J9	622 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	AKAP12	Q02952	1782 aa		6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	CPSF1	Q10570	1443 aa	Known RBP	6.08	□□□□□ -1.44
RBM39-240	ENST00000495293	KIAA0232	Q92628	1395 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	WTIP	A6NIX2	430 aa	Predicted RBP	6.07	□□□□□ -1.44
RBM39-240	ENST00000495293		H0Y8X5	98 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	HDLBP	Q00341	1268 aa	Known RBP	6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	MVK	Q03426	396 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	RAB3GAP1	Q15042	981 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	VPS72	Q15906	364 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	DCAF15	Q66K64	600 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	RNF34	Q969K3	372 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	FBXL21	Q9UKT6	434 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	ZNRF3	Q9ULT6	936 aa		6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	COL14A1	Q05707	1796 aa	Known RBP	6.07	□□□□□ -1.44
RBM39-240	ENST00000495293	EDC4	Q6P2E9	1401 aa	Known RBP	6.07	□□□□□ -1.44
RBM39-240	ENST00000495293		A0A1W2PP64	1363 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	ANKRD36B	Q8N2N9	1353 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	SLIT2	O94813	1529 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	NWD2	Q9ULI1	1742 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	ZNF165	P49910	485 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	NFIX	Q14938	502 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	CHRNA2	Q15822	529 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	PLEKHN1	Q494U1	663 aa	Predicted RBP	6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	CNKSR3	Q6P9H4	555 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	NME9	Q86XW9	330 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	C7orf61	Q8IZ16	206 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	ADAM7	Q9H2U9	754 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	METTL5	Q9NRN9	209 aa	Known RBP	6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	DDX41	Q9UJV9	622 aa	Known RBP	6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	BCL9L	Q86UU0	1499 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	PHRF1	Q9P1Y6	1649 aa	Known RBP	6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	CPD	O75976	1380 aa		6.06	□□□□□ -1.44
RBM39-240	ENST00000495293	MON2	Q7Z3U7	1717 aa		6.05	□□□□□ -1.44
RBM39-240	ENST00000495293	ABCA3	Q99758	1704 aa		6.05	□□□□□ -1.44
RBM39-240	ENST00000495293	USP19	O94966	1318 aa		6.05	□□□□□ -1.44
RBM39-240	ENST00000495293	PLCH1	Q4KWH8	1693 aa		6.05	□□□□□ -1.44
RBM39-240	ENST00000495293	CDK12	Q9NYV4	1490 aa	Predicted RBP	6.05	□□□□□ -1.44

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