RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 STK32CQ86UX6 486 aa6.93□□□□□ -1.3
CCDC66-222ENST00000494672 TOE1Q96GM8 510 aaKnown RBP6.93□□□□□ -1.3
CCDC66-222ENST00000494672 SYT3Q9BQG1 590 aa6.93□□□□□ -1.3
CCDC66-222ENST00000494672 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
CCDC66-222ENST00000494672 FBXL7Q9UJT9 491 aa6.93□□□□□ -1.3
CCDC66-222ENST00000494672 ZNF652Q9Y2D9 606 aa6.93□□□□□ -1.3
CCDC66-222ENST00000494672 A0A1W2PQU0 124 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 IQCA1LA6NCM1 817 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 K7ESM1 405 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 MAFKO60675 156 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 STAT5AP42229 794 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 ITGA1P56199 1179 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 MAP4K2Q12851 820 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 HSP90AA2PQ14568 343 aaPredicted RBP6.92□□□□□ -1.3
CCDC66-222ENST00000494672 FAM124AQ86V42 546 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 HNRNPLLQ8WVV9 542 aaKnown RBP6.92□□□□□ -1.3
CCDC66-222ENST00000494672 C1orf159Q96HA4 380 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 SGSM3Q96HU1 749 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 GMLQ99445 158 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 EPB41L1Q9H4G0 881 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 PCDHB4Q9Y5E5 795 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 NPFFR2Q9Y5X5 522 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 DUSP10Q9Y6W6 482 aa6.92□□□□□ -1.3
CCDC66-222ENST00000494672 TADA3O75528 432 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 ADRB1P08588 477 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 GRIA2P42262 883 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 CR1LQ2VPA4 569 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 RGL3Q3MIN7 710 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 FAM26FQ5R3K3 315 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 MCTP2Q6DN12 878 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 NPM2Q86SE8 214 aaKnown RBP6.91□□□□□ -1.3
CCDC66-222ENST00000494672 FAM9AQ8IZU1 332 aaPredicted RBP6.91□□□□□ -1.3
CCDC66-222ENST00000494672 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.91□□□□□ -1.3
CCDC66-222ENST00000494672 ZNF428Q96B54 188 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 BORCS6Q96GS4 357 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 IER2Q9BTL4 223 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 GPR27Q9NS67 375 aa6.91□□□□□ -1.3
CCDC66-222ENST00000494672 TCRBV5S2A0A599 114 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 KRIT1O00522 736 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 DDX3XO00571 662 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC66-222ENST00000494672 EFEMP1Q12805 493 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 DDR2Q16832 855 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 EMC4Q5J8M3 183 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 LGI4Q8N135 537 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 ARRDC4Q8NCT1 418 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 PHOSPHO1Q8TCT1 267 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 SMOC1Q9H4F8 434 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 DTLQ9NZJ0 730 aa6.9□□□□□ -1.3
CCDC66-222ENST00000494672 MROH6A6NGR9 719 aa6.89□□□□□ -1.31
CCDC66-222ENST00000494672 DLX3O60479 287 aa6.89□□□□□ -1.31
CCDC66-222ENST00000494672 RBM25P49756 843 aaKnown RBP6.89□□□□□ -1.31
CCDC66-222ENST00000494672 PRAMEF18Q5VWM3 479 aa6.89□□□□□ -1.31
CCDC66-222ENST00000494672 BORAQ6PGQ7 559 aa6.89□□□□□ -1.31
CCDC66-222ENST00000494672 RSPO2Q6UXX9 243 aaPredicted RBP6.89□□□□□ -1.31
CCDC66-222ENST00000494672 USP53Q70EK8 1073 aa6.89□□□□□ -1.31
CCDC66-222ENST00000494672 CELF2-AS1Q8N7Q2 184 aa6.89□□□□□ -1.31
CCDC66-222ENST00000494672 TXNDC5Q8NBS9 432 aaKnown RBP6.89□□□□□ -1.31
CCDC66-222ENST00000494672 KLF4O43474 513 aa6.88□□□□□ -1.31
CCDC66-222ENST00000494672 CYP7B1O75881 506 aa6.88□□□□□ -1.31
CCDC66-222ENST00000494672 ADAM9Q13443 819 aa6.88□□□□□ -1.31
CCDC66-222ENST00000494672 PRR31Q5SQ13 230 aa6.88□□□□□ -1.31
CCDC66-222ENST00000494672 TRIM48Q8IWZ4 208 aa6.88□□□□□ -1.31
CCDC66-222ENST00000494672 CLIC6Q96NY7 704 aa6.88□□□□□ -1.31
CCDC66-222ENST00000494672 MYOTQ9UBF9 498 aa6.88□□□□□ -1.31
CCDC66-222ENST00000494672 ITGB3P05106 788 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 NFKB2Q00653 900 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 ZNF827Q17R98 1081 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 CYP4F22Q6NT55 531 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 TEPPQ6URK8 271 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 DCAF4Q8WV16 495 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 LCORQ96JN0 433 aaPredicted RBP6.87□□□□□ -1.31
CCDC66-222ENST00000494672 AARSD1Q9BTE6 412 aaKnown RBP6.87□□□□□ -1.31
CCDC66-222ENST00000494672 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 SLC6A20Q9NP91 592 aa6.87□□□□□ -1.31
CCDC66-222ENST00000494672 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 PRODHO43272 600 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 FGFR1P11362 822 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 IL13P35225 146 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 HHIPL2Q6UWX4 724 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 ST13P5Q8NFI4 369 aaPredicted RBP6.86□□□□□ -1.31
CCDC66-222ENST00000494672 WRNIP1Q96S55 665 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 L2HGDHQ9H9P8 463 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 ASH2LQ9UBL3 628 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 INVSQ9Y283 1065 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 NUB1Q9Y5A7 615 aa6.86□□□□□ -1.31
CCDC66-222ENST00000494672 MSCO60682 206 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 PLATP00750 562 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 LRG1P02750 347 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 CYP1A1P04798 512 aaPredicted RBP6.85□□□□□ -1.31
CCDC66-222ENST00000494672 RAB33AQ14088 237 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 NSMFQ6X4W1 530 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 LRRC47Q8N1G4 583 aaKnown RBP6.85□□□□□ -1.31
CCDC66-222ENST00000494672 TMEM209Q96SK2 561 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 RBM15Q96T37 977 aaKnown RBP eCLIP6.85□□□□□ -1.31
CCDC66-222ENST00000494672 GPR20Q99678 358 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 ZFYVE21Q9BQ24 234 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
CCDC66-222ENST00000494672 CROTQ9UKG9 612 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms