RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PRR5P85299 388 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 ZNF200P98182 395 aaPredicted RBP3.43□□□□□ -1.86
LMNB1-207ENST00000494185 TCEA2Q15560 299 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 ZNF648Q5T619 568 aaPredicted RBP3.43□□□□□ -1.86
LMNB1-207ENST00000494185 STEAP3Q658P3 488 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 LBX2Q6XYB7 198 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 TTLL7Q6ZT98 887 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 C16orf86Q6ZW13 317 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 MILR1Q7Z6M3 343 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 TEX2Q8IWB9 1127 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 WDR48Q8TAF3 677 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 CPA5Q8WXQ8 436 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 MAGEB10Q96LZ2 347 aaPredicted RBP3.43□□□□□ -1.86
LMNB1-207ENST00000494185 MCOLN1Q9GZU1 580 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 SMOC1Q9H4F8 434 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 NCOA5Q9HCD5 579 aaKnown RBP3.43□□□□□ -1.86
LMNB1-207ENST00000494185 FANCLQ9NW38 375 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.43□□□□□ -1.86
LMNB1-207ENST00000494185 NDOR1Q9UHB4 597 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 MBD1Q9UIS9 605 aaPredicted RBP3.43□□□□□ -1.86
LMNB1-207ENST00000494185 ZC3H12DA2A288 527 aaKnown RBP3.42□□□□□ -1.86
LMNB1-207ENST00000494185 ETV2O00321 342 aaPredicted RBP3.42□□□□□ -1.86
LMNB1-207ENST00000494185 ARNTLO00327 626 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 ENPP3O14638 875 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 PLD2O14939 933 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 BUB1BO60566 1050 aaPredicted RBP3.42□□□□□ -1.86
LMNB1-207ENST00000494185 SASH1O94885 1247 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 ASMTLO95671 621 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 EFEMP2O95967 443 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 SOD2P04179 222 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 MSL3P1P0C860 447 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 LCP1P13796 627 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 CAP1Q01518 475 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 GUCY1A3Q02108 690 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 MESP2Q0VG99 397 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 KIR3DS1Q14943 382 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 CRY1Q16526 586 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 EMC4Q5J8M3 183 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 SDE2Q6IQ49 451 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 CNKSR3Q6P9H4 555 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 KCNT2Q6UVM3 1135 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 DDX53Q86TM3 631 aaKnown RBP3.42□□□□□ -1.86
LMNB1-207ENST00000494185 FAM124AQ86V42 546 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 DPF3Q92784 378 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 FBXW5Q969U6 566 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 MTA3Q9BTC8 594 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 KLHL14Q9P2G3 628 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 MYOTQ9UBF9 498 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 PLAAQ9Y263 795 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 TRAF6Q9Y4K3 522 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 PMF1-BGLAPU3KQ54 211 aa3.42□□□□□ -1.86
LMNB1-207ENST00000494185 NPIPB6E9PJ23 425 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 PPP1R12AO14974 1030 aaPredicted RBP3.41□□□□□ -1.86
LMNB1-207ENST00000494185 MAFGO15525 162 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 MSCO60682 206 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 PPP1R11O60927 126 aaPredicted RBP3.41□□□□□ -1.86
LMNB1-207ENST00000494185 RAPGEF3O95398 923 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 FPR2P25090 351 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 CACNB2Q08289 660 aaPredicted RBP3.41□□□□□ -1.86
LMNB1-207ENST00000494185 FNDC3BQ53EP0 1204 aaKnown RBP3.41□□□□□ -1.86
LMNB1-207ENST00000494185 TRIM61Q5EBN2 209 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 UBE2R2Q712K3 238 aaPredicted RBP3.41□□□□□ -1.86
LMNB1-207ENST00000494185 B3GNT8Q7Z7M8 397 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 LDHDQ86WU2 507 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 SIAH1Q8IUQ4 282 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 FAM126BQ8IXS8 530 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 LRRC56Q8IYG6 542 aaPredicted RBP3.41□□□□□ -1.86
LMNB1-207ENST00000494185 TTLL6Q8N841 843 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 TTLL11Q8NHH1 800 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 PLEKHO2Q8TD55 490 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 TOE1Q96GM8 510 aaKnown RBP3.41□□□□□ -1.86
LMNB1-207ENST00000494185 CLIC6Q96NY7 704 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 TMEM209Q96SK2 561 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 FEZ1Q99689 392 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 SLC52A2Q9HAB3 445 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 CABP5Q9NP86 173 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 SLC6A20Q9NP91 592 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 CD320Q9NPF0 282 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 CATSPERZQ9NTU4 200 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 NTMQ9P121 344 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 FBXL7Q9UJT9 491 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 SMG5Q9UPR3 1016 aaKnown RBP3.41□□□□□ -1.86
LMNB1-207ENST00000494185 KCTD3Q9Y597 815 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 ASXL2Q76L83 1435 aa3.41□□□□□ -1.86
LMNB1-207ENST00000494185 CADPSQ9ULU8 1353 aa3.4□□□□□ -1.86
LMNB1-207ENST00000494185 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.4□□□□□ -1.87
LMNB1-207ENST00000494185 KCNQ2O43526 872 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 RFPL3O75679 317 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 CRTAMO95727 393 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 C1QTNF9P0C862 333 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 CDK11BP21127 795 aaKnown RBP3.4□□□□□ -1.87
LMNB1-207ENST00000494185 SDHBP21912 280 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 HSD3B2P26439 372 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 AFF3P51826 1226 aaKnown RBP3.4□□□□□ -1.87
LMNB1-207ENST00000494185 PABPC4Q13310 644 aaKnown RBP eCLIP3.4□□□□□ -1.87
LMNB1-207ENST00000494185 SART3Q15020 963 aaKnown RBP3.4□□□□□ -1.87
LMNB1-207ENST00000494185 GPR19Q15760 415 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 ARHGAP44Q17R89 818 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 ZNF568Q3ZCX4 644 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 PLEKHG4Q58EX7 1191 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms