RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 CHRNA2Q15822 529 aa8.16□□□□□ -1.1
SSB-212ENST00000494051 ZNF385BQ569K4 471 aa8.16□□□□□ -1.1
SSB-212ENST00000494051 CIAPIN1Q6FI81 312 aa8.16□□□□□ -1.1
SSB-212ENST00000494051 PANK1Q8TE04 598 aa8.16□□□□□ -1.1
SSB-212ENST00000494051 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.16□□□□□ -1.1
SSB-212ENST00000494051 RNF38Q9H0F5 515 aa8.16□□□□□ -1.1
SSB-212ENST00000494051 IRF2BPLQ9H1B7 796 aa8.16□□□□□ -1.1
SSB-212ENST00000494051 NDOR1Q9UHB4 597 aa8.16□□□□□ -1.1
SSB-212ENST00000494051 PCDHA8Q9Y5H6 950 aa8.16□□□□□ -1.1
SSB-212ENST00000494051 CFPP27918 469 aa8.15□□□□□ -1.1
SSB-212ENST00000494051 GUCY1A3Q02108 690 aa8.15□□□□□ -1.1
SSB-212ENST00000494051 AMIGO3Q86WK7 504 aa8.15□□□□□ -1.1
SSB-212ENST00000494051 CILP2Q8IUL8 1156 aa8.15□□□□□ -1.1
SSB-212ENST00000494051 LRRC56Q8IYG6 542 aaPredicted RBP8.15□□□□□ -1.1
SSB-212ENST00000494051 PIP4K2CQ8TBX8 421 aa8.15□□□□□ -1.1
SSB-212ENST00000494051 SH3TC2Q8TF17 1288 aa8.15□□□□□ -1.1
SSB-212ENST00000494051 CCDC163A0A0D9SF12 145 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 FAM47E-STBD1D6RA91 191 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 KRIT1O00522 736 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 GNAT1P11488 350 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 COL6A2P12110 1019 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 IGFBP6P24592 240 aaPredicted RBP8.14□□□□□ -1.11
SSB-212ENST00000494051 PAK1Q13153 545 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 CNKSR3Q6P9H4 555 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 TMEFF1Q8IYR6 380 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 YIPF4Q9BSR8 244 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 IPPKQ9H8X2 491 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 KANSL2Q9H9L4 492 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 PCDHB4Q9Y5E5 795 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 PCDHA9Q9Y5H5 950 aa8.14□□□□□ -1.11
SSB-212ENST00000494051 FOXO4P98177 505 aa8.13□□□□□ -1.11
SSB-212ENST00000494051 SPIRE1Q08AE8 756 aa8.13□□□□□ -1.11
SSB-212ENST00000494051 ETV3LQ6ZN32 361 aa8.13□□□□□ -1.11
SSB-212ENST00000494051 FAM129CQ86XR2 697 aa8.13□□□□□ -1.11
SSB-212ENST00000494051 ZSCAN18Q8TBC5 510 aaPredicted RBP8.13□□□□□ -1.11
SSB-212ENST00000494051 PWWP2AQ96N64 755 aa8.13□□□□□ -1.11
SSB-212ENST00000494051 SLC52A2Q9HAB3 445 aa8.13□□□□□ -1.11
SSB-212ENST00000494051 EPB41L4AQ9HCS5 686 aaPredicted RBP8.13□□□□□ -1.11
SSB-212ENST00000494051 SLC6A20Q9NP91 592 aa8.13□□□□□ -1.11
SSB-212ENST00000494051 ZNF652Q9Y2D9 606 aa8.13□□□□□ -1.11
SSB-212ENST00000494051 MAFKO60675 156 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 TADA3O75528 432 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 CRTAMO95727 393 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 SRGAP2CP0DJJ0 459 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 CACNB2Q08289 660 aaPredicted RBP8.12□□□□□ -1.11
SSB-212ENST00000494051 SQSTM1Q13501 440 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 EMC4Q5J8M3 183 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 OTOP3Q7RTS5 596 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 CPA5Q8WXQ8 436 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 DDX11Q96FC9 970 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 MYOTQ9UBF9 498 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 SFMBT1Q9UHJ3 866 aa8.12□□□□□ -1.11
SSB-212ENST00000494051 TCRBV5S2A0A599 114 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 EFCAB14O75071 495 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 APPP05067 770 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 NAT1P18440 290 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 CD300LDQ6UXZ3 194 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 B3GNT8Q7Z7M8 397 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 FAM26EQ8N5C1 309 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 ARRDC4Q8NCT1 418 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 PCDH19Q8TAB3 1148 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 SMARCC2Q8TAQ2 1214 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 SLC7A14Q8TBB6 771 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 SMOC1Q9H4F8 434 aa8.11□□□□□ -1.11
SSB-212ENST00000494051 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.1□□□□□ -1.11
SSB-212ENST00000494051 SLC27A2O14975 620 aa8.1□□□□□ -1.11
SSB-212ENST00000494051 STAT5AP42229 794 aa8.1□□□□□ -1.11
SSB-212ENST00000494051 JAG1P78504 1218 aa8.1□□□□□ -1.11
SSB-212ENST00000494051 MIB1Q86YT6 1006 aa8.1□□□□□ -1.11
SSB-212ENST00000494051 C1QL4Q86Z23 238 aa8.1□□□□□ -1.11
SSB-212ENST00000494051 ZC3H7AQ8IWR0 971 aaKnown RBP8.1□□□□□ -1.11
SSB-212ENST00000494051 RBM12BQ8IXT5 1001 aaKnown RBP8.1□□□□□ -1.11
SSB-212ENST00000494051 MAGEB10Q96LZ2 347 aaPredicted RBP8.1□□□□□ -1.11
SSB-212ENST00000494051 MRPL4Q9BYD3 311 aaKnown RBP8.1□□□□□ -1.11
SSB-212ENST00000494051 NCOA5Q9HCD5 579 aaKnown RBP8.1□□□□□ -1.11
SSB-212ENST00000494051 CATSPERZQ9NTU4 200 aa8.1□□□□□ -1.11
SSB-212ENST00000494051 ARVCFO00192 962 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 NKRFO15226 690 aaKnown RBP eCLIP8.09□□□□□ -1.11
SSB-212ENST00000494051 RASGRP1O95267 797 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 RAPGEF3O95398 923 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 C8BP07358 591 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 CYP2C8P10632 490 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 AFF3P51826 1226 aaKnown RBP8.09□□□□□ -1.11
SSB-212ENST00000494051 ST5P78524 1137 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 TRIM61Q5EBN2 209 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 TCERG1LQ5VWI1 586 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 ZC3H18Q86VM9 953 aaKnown RBP8.09□□□□□ -1.11
SSB-212ENST00000494051 FAM126BQ8IXS8 530 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 NLGN1Q8N2Q7 840 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 GSTCDQ8NEC7 633 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 PHOSPHO1Q8TCT1 267 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 FBXW5Q969U6 566 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 DACT3Q96B18 629 aaPredicted RBP8.09□□□□□ -1.11
SSB-212ENST00000494051 RNPC3Q96LT9 517 aaKnown RBP8.09□□□□□ -1.11
SSB-212ENST00000494051 PMF1-BGLAPU3KQ54 211 aa8.09□□□□□ -1.11
SSB-212ENST00000494051 ESYT3A0FGR9 886 aa8.08□□□□□ -1.12
SSB-212ENST00000494051 PPP1R12AO14974 1030 aaPredicted RBP8.08□□□□□ -1.12
SSB-212ENST00000494051 ZSCAN22P10073 491 aaPredicted RBP8.08□□□□□ -1.12
SSB-212ENST00000494051 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
SSB-212ENST00000494051 BRAPQ7Z569 592 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms