RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PYGLP06737 847 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 TGFB3P10600 412 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 ZBED6P86452 979 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 IRF5Q13568 498 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 CCDC92Q53HC0 331 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-222ENST00000493919 CTCFLQ8NI51 663 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-222ENST00000493919 ZNF296Q8WUU4 475 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-222ENST00000493919 EXOC4Q96A65 974 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 NACC2Q96BF6 587 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 EIF3CQ99613 913 aaKnown RBP12.93□□□□□ -0.34
BRCA1-222ENST00000493919 CFHR5Q9BXR6 569 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 TCP11L1Q9NUJ3 509 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 CASP8AP2Q9UKL3 1982 aa12.93□□□□□ -0.34
BRCA1-222ENST00000493919 A0A087WUV0 522 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 ERICH2A1L162 156 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 PDLIM1O00151 329 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 TOP1P11387 765 aaKnown RBP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 HOXA7P31268 230 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 NT5C2P49902 561 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 HERVK_113P62684 666 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 NSUN2Q08J23 767 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 SLFN13Q68D06 897 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 MB21D2Q8IYB1 491 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 RASEFQ8IZ41 740 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 ENAHQ8N8S7 591 aaPredicted RBP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 MPP4Q96JB8 637 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 TMEM47Q9BQJ4 181 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 PAGR1Q9BTK6 254 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 KLHL40Q2TBA0 621 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 IFIT1BQ5T764 474 aaKnown RBP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 RCSD1Q6JBY9 416 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 CATSPERGQ6ZRH7 1159 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 SEPT14Q6ZU15 432 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 MICALCLQ6ZW33 695 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 LCA5Q86VQ0 697 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 ANKRD13CQ8N6S4 541 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 GMCL1P1Q8NEA9 526 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 JAKMIP2Q96AA8 810 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 P2RX7Q99572 595 aaKnown RBP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 KAT14Q9H8E8 782 aa12.92□□□□□ -0.34
BRCA1-222ENST00000493919 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRCA1-222ENST00000493919 ADGRA2Q96PE1 1338 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 FKTNO75072 461 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 RPL17P18621 184 aaKnown RBP12.91□□□□□ -0.34
BRCA1-222ENST00000493919 HSPA4P34932 840 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 SLC1A4P43007 532 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 IKQ13123 557 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-222ENST00000493919 COL9A3Q14050 684 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-222ENST00000493919 FAAH2Q6GMR7 532 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 KCNN1Q92952 543 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 SCYL1Q96KG9 808 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 MMADHCQ9H3L0 296 aaPredicted RBP12.91□□□□□ -0.34
BRCA1-222ENST00000493919 FBXO28Q9NVF7 368 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 WDR37Q9Y2I8 494 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 ZSWIM8A7E2V4 1837 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 PARP14Q460N5 1801 aa12.91□□□□□ -0.34
BRCA1-222ENST00000493919 SPDYE16A6NNV3 312 aaPredicted RBP12.9□□□□□ -0.34
BRCA1-222ENST00000493919 SMTNL1A8MU46 457 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 PRC1O43663 620 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 PEX10O60683 326 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 ANTXR2P58335 489 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 SP3Q02447 781 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 KRT32Q14532 448 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 ADCK5Q3MIX3 580 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 KCTD1Q719H9 257 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 PNMA1Q8ND90 353 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 ERMNQ8TAM6 284 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 TTC14Q96N46 770 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 NEK1Q96PY6 1258 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 SNX14Q9Y5W7 946 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 IKBKGQ9Y6K9 419 aa12.9□□□□□ -0.34
BRCA1-222ENST00000493919 BMP3P12645 472 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 GCLCP48506 637 aaPredicted RBP12.9□□□□□ -0.35
BRCA1-222ENST00000493919 NOVP48745 357 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 WTAPQ15007 396 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 TMEM67Q5HYA8 995 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 C17orf99Q6UX52 265 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 TMEM110Q86TL2 294 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 DGKHQ86XP1 1220 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 LRRC49Q8IUZ0 686 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 NEK11Q8NG66 645 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 CD99L2Q8TCZ2 262 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 ATG4CQ96DT6 458 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 TCEANC2Q96MN5 208 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 JAKMIP1Q96N16 626 aaKnown RBP12.9□□□□□ -0.35
BRCA1-222ENST00000493919 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.35
BRCA1-222ENST00000493919 MAP3K20Q9NYL2 800 aaKnown RBP12.9□□□□□ -0.35
BRCA1-222ENST00000493919 FRMPD2Q68DX3 1309 aaPredicted RBP12.89□□□□□ -0.35
BRCA1-222ENST00000493919 A0A0G2JMZ2 1700 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 TMEM110-MUSTN1A8MSY1 372 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 BCRP11274 1271 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 SMARCA1P28370 1054 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 GCKP35557 465 aa12.89□□□□□ -0.35
BRCA1-222ENST00000493919 COG2Q14746 738 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms