RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 AGPAT5Q9NUQ2 364 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 REXO2Q9Y3B8 237 aaKnown RBP10.7□□□□□ -0.7
NPHP3-209ENST00000493732 COL4A3BPQ9Y5P4 624 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 SAR1BQ9Y6B6 198 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 ATRNL1Q5VV63 1379 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 SPDYE3A6NKU9 549 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 ECE2O60344 883 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 EIF3JO75822 258 aaKnown RBP10.7□□□□□ -0.7
NPHP3-209ENST00000493732 MARSP56192 900 aaKnown RBP10.7□□□□□ -0.7
NPHP3-209ENST00000493732 COASYQ13057 564 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 TERF2Q15554 542 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 BTNL9Q6UXG8 535 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 TRAPPC11Q7Z392 1133 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 FBXO11Q86XK2 927 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 CLEC10AQ8IUN9 316 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 KIAA0825Q8IV33 1275 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 TRIM58Q8NG06 486 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 NEK11Q8NG66 645 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 DNAJC19Q96DA6 116 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 ACBD3Q9H3P7 528 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 DBNDD1Q9H9R9 158 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 PUF60Q9UHX1 559 aaKnown RBP10.7□□□□□ -0.7
NPHP3-209ENST00000493732 SIK3Q9Y2K2 1263 aa10.7□□□□□ -0.7
NPHP3-209ENST00000493732 F5H6K3 240 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 TACC1O75410 805 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 LCA5LO95447 670 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 KRT18P05783 430 aaKnown RBP10.69□□□□□ -0.7
NPHP3-209ENST00000493732 PLA2G4BP0C869 781 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 MMP14P50281 582 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 HERVK_113P62684 666 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 KLRC3Q07444 240 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 EDRF1Q3B7T1 1238 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 RBM26Q5T8P6 1007 aaKnown RBP10.69□□□□□ -0.7
NPHP3-209ENST00000493732 CCDC70Q6NSX1 233 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 LRRC55Q6ZSA7 311 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 HDXQ7Z353 690 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 MXD3Q9BW11 206 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 DEF6Q9H4E7 631 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 DNAJC18Q9H819 358 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 MMRN2Q9H8L6 949 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 TMOD2Q9NZR1 351 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 FAM198AQ9UFP1 575 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 HERC5Q9UII4 1024 aaKnown RBP10.69□□□□□ -0.7
NPHP3-209ENST00000493732 KIAA1024Q9UPX6 916 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 DNM3Q9UQ16 869 aa10.69□□□□□ -0.7
NPHP3-209ENST00000493732 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 SSU72P8A0A1W2PR75 194 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 RASSF10A6NK89 507 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 TRAF5O00463 557 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 APBA3O96018 575 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 BMP3P12645 472 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 PRLRP16471 622 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 SREBF1P36956 1147 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 ARHGAP4P98171 946 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 LONRF2Q1L5Z9 754 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 MAP9Q49MG5 647 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 CCDC40Q4G0X9 1142 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 SYDE2Q5VT97 1194 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 WDR93Q6P2C0 686 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 CACNA2D4Q7Z3S7 1137 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 SECISBP2LQ93073 1101 aaKnown RBP10.68□□□□□ -0.7
NPHP3-209ENST00000493732 ALS2CR12Q96Q35 445 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 PURBQ96QR8 312 aaKnown RBP10.68□□□□□ -0.7
NPHP3-209ENST00000493732 NUDT12Q9BQG2 462 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 JRKLQ9Y4A0 524 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 A0A0U1RQJ8 604 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 FRMD3A2A2Y4 597 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 TARSL2A2RTX5 802 aaKnown RBP10.68□□□□□ -0.7
NPHP3-209ENST00000493732 DDTLA6NHG4 134 aaPredicted RBP10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L15C9J2P7 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L13C9JLJ4 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L11C9JVI0 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L18D6R9N7 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L22D6RA61 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L17D6RBQ6 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L19D6RCP7 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L20D6RJB6 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 PIK3CDO00329 1044 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 MEIS2O14770 477 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 RAD21O60216 631 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 AKR1B10O60218 316 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 TBC1D8O95759 1140 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 SSBP05455 408 aaKnown RBP eCLIP10.68□□□□□ -0.7
NPHP3-209ENST00000493732 RPA1P27694 616 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 CIITAP33076 1130 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L24Q0WX57 530 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 TCP10Q12799 353 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 IKQ13123 557 aaPredicted RBP10.68□□□□□ -0.7
NPHP3-209ENST00000493732 HERC4Q5GLZ8 1057 aaPredicted RBP10.68□□□□□ -0.7
NPHP3-209ENST00000493732 USP17L6PQ6QN14 398 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 ZNF771Q7L3S4 317 aaPredicted RBP10.68□□□□□ -0.7
NPHP3-209ENST00000493732 KCNK18Q7Z418 384 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 GPBP1Q86WP2 473 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 CCDC155Q8N6L0 562 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 ATRIPQ8WXE1 791 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 CRYGNQ8WXF5 182 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 RUBCNQ92622 972 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 IFIH1Q9BYX4 1025 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms