RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.49□□□□□ -0.09
PTK7-218ENST00000493339 ISCUQ9H1K1 167 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 KDM4CQ9H3R0 1056 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.49□□□□□ -0.09
PTK7-218ENST00000493339 C15orf41Q9Y2V0 281 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 CYP2D7A0A087X1C5 515 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 PJA2O43164 708 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 MAP2K1Q02750 393 aaPredicted RBP14.49□□□□□ -0.09
PTK7-218ENST00000493339 USP38Q8NB14 1042 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 ZBTB10Q96DT7 871 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 CHMP6Q96FZ7 201 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 ZSCAN10Q96SZ4 725 aaPredicted RBP14.49□□□□□ -0.09
PTK7-218ENST00000493339 TMEM60Q9H2L4 133 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 SLC39A2Q9NP94 309 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 GGT7Q9UJ14 662 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 TRPC6Q9Y210 931 aa14.49□□□□□ -0.09
PTK7-218ENST00000493339 LRP6O75581 1613 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 ORC4O43929 436 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 PDE8BO95263 885 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 RASGRF1Q13972 1273 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 SRBD1Q8N5C6 995 aaKnown RBP14.48□□□□□ -0.09
PTK7-218ENST00000493339 RNF10Q8N5U6 811 aaKnown RBP14.48□□□□□ -0.09
PTK7-218ENST00000493339 PARD3BQ8TEW8 1205 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 AGAP11Q8TF27 550 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 TAF4BQ92750 862 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 CEP104O60308 925 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 DIAPH2O60879 1101 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 ARMC9Q7Z3E5 817 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 DDX47Q9H0S4 455 aaKnown RBP14.48□□□□□ -0.09
PTK7-218ENST00000493339 EBF2Q9HAK2 575 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 PANK4Q9NVE7 773 aa14.48□□□□□ -0.09
PTK7-218ENST00000493339 PKD1L3Q7Z443 1732 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 RCAN1P53805 252 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 CAPRIN2Q6IMN6 1127 aaKnown RBP14.47□□□□□ -0.09
PTK7-218ENST00000493339 CCDC47Q96A33 483 aaKnown RBP14.47□□□□□ -0.09
PTK7-218ENST00000493339 SELENOSQ9BQE4 189 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 PACSIN1Q9BY11 444 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 KBTBD4Q9NVX7 518 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 PNMA2Q9UL42 364 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 USP54Q70EL1 1684 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 DAPK3O43293 454 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 UQCRFS1P1P0C7P4 283 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 TRAPPC10P48553 1259 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 TROAPQ12815 778 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 KIAA0753Q2KHM9 967 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 AP1ARQ63HQ0 302 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 ARL6IP4Q66PJ3 421 aaKnown RBP14.47□□□□□ -0.09
PTK7-218ENST00000493339 TMTC3Q6ZXV5 915 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 STAG2Q8N3U4 1231 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 C4orf32Q8N8J7 132 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 ANKS4BQ8N8V4 417 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 BAP1Q92560 729 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 GPKOWQ92917 476 aaPredicted RBP eCLIP14.47□□□□□ -0.09
PTK7-218ENST00000493339 SAAL1Q96ER3 474 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 PSMD1Q99460 953 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 ISCA1Q9BUE6 129 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 TRIM31Q9BZY9 425 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 YIPF3Q9GZM5 350 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 SEMA6BQ9H3T3 888 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 FAM205AQ6ZU69 1335 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 MYH6P13533 1939 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 AKAP11Q9UKA4 1901 aa14.47□□□□□ -0.09
PTK7-218ENST00000493339 GRID2IPA4D2P6 1211 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 SMIM23A6NLE4 172 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 UPP2O95045 317 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 GHRP10912 638 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 SCG2P13521 617 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 PLCG1P19174 1290 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 PPP2R5BQ15173 497 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 TBC1D5Q92609 795 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 P3H4Q92791 437 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 XPO6Q96QU8 1125 aaKnown RBP14.46□□□□□ -0.09
PTK7-218ENST00000493339 MEGF6O75095 1541 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 CLSTN1O94985 981 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 CSF1RP07333 972 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 ARID4AP29374 1257 aaPredicted RBP14.46□□□□□ -0.09
PTK7-218ENST00000493339 DHX9Q08211 1270 aaKnown RBP14.46□□□□□ -0.09
PTK7-218ENST00000493339 ASTE1Q2TB18 679 aaPredicted RBP14.46□□□□□ -0.09
PTK7-218ENST00000493339 MEI1Q5TIA1 1274 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 PDXDC1Q6P996 788 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 CCDC84Q86UT8 332 aaPredicted RBP14.46□□□□□ -0.09
PTK7-218ENST00000493339 DNAAF5Q86Y56 855 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 PRCCQ92733 491 aaPredicted RBP14.46□□□□□ -0.09
PTK7-218ENST00000493339 ZNF512BQ96KM6 892 aaPredicted RBP14.46□□□□□ -0.09
PTK7-218ENST00000493339 ZNF570Q96NI8 536 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 TRIM9Q9C026 710 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 DPH5Q9H2P9 285 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 CNTNAP5Q8WYK1 1306 aa14.46□□□□□ -0.09
PTK7-218ENST00000493339 SART1O43290 800 aaKnown RBP14.46□□□□□ -0.1
PTK7-218ENST00000493339 NMT2O60551 498 aa14.46□□□□□ -0.1
PTK7-218ENST00000493339 AP1G2O75843 785 aa14.46□□□□□ -0.1
PTK7-218ENST00000493339 CUL1Q13616 776 aa14.46□□□□□ -0.1
PTK7-218ENST00000493339 HGSNATQ68CP4 663 aa14.46□□□□□ -0.1
PTK7-218ENST00000493339 ELAC2Q9BQ52 826 aaKnown RBP14.46□□□□□ -0.1
PTK7-218ENST00000493339 FAM167BQ9BTA0 163 aa14.46□□□□□ -0.1
PTK7-218ENST00000493339 BATF3Q9NR55 127 aa14.46□□□□□ -0.1
PTK7-218ENST00000493339 RBM28Q9NW13 759 aaKnown RBP14.46□□□□□ -0.1
PTK7-218ENST00000493339 LRP2BPQ9P2M1 347 aa14.46□□□□□ -0.1
PTK7-218ENST00000493339 SWAP70Q9UH65 585 aa14.46□□□□□ -0.1
PTK7-218ENST00000493339 AMACRQ9UHK6 382 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms