RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PCBP1Q15365 356 aaKnown RBP eCLIP4.62□□□□□ -1.677e-11■■■■■ 49.2
HFM1-208ENST00000488023 FNDC3BQ53EP0 1204 aaKnown RBP4.62□□□□□ -1.67
HFM1-208ENST00000488023 ANKRD39Q53RE8 183 aa4.62□□□□□ -1.67
HFM1-208ENST00000488023 CDC6Q99741 560 aa4.62□□□□□ -1.67
HFM1-208ENST00000488023 PRDM14Q9GZV8 571 aa4.62□□□□□ -1.67
HFM1-208ENST00000488023 MKRN2Q9H000 416 aaKnown RBP4.62□□□□□ -1.67
HFM1-208ENST00000488023 PHAXQ9H814 394 aaKnown RBP4.62□□□□□ -1.67
HFM1-208ENST00000488023 TCFL5Q9UL49 500 aa4.62□□□□□ -1.67
HFM1-208ENST00000488023 SLC12A7Q9Y666 1083 aa4.62□□□□□ -1.67
HFM1-208ENST00000488023 CCDC163A0A0D9SF12 145 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 A0A1W2PQU0 124 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 IQCA1LA6NCM1 817 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 CBFA2T2O43439 604 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 NRDCO43847 1150 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 USP2O75604 605 aaPredicted RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 PRAMEF1O95521 474 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 RPL10P27635 214 aaKnown RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 KIR2DL1P43626 348 aaPredicted RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 KIR2DL2P43627 348 aaPredicted RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 YBX1P67809 324 aaKnown RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 PLP2Q04941 152 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 STAT4Q14765 748 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 VPS72Q15906 364 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 LONRF3Q496Y0 759 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 ZC3H12BQ5HYM0 836 aaKnown RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 SP8Q8IXZ3 490 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 TMEFF1Q8IYR6 380 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 SYT8Q8NBV8 401 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 COG1Q8WTW3 980 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 DDX1Q92499 740 aaKnown RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 ZNF512BQ96KM6 892 aaPredicted RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 LGR4Q9BXB1 951 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 FOXP3Q9BZS1 431 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 CHST7Q9NS84 486 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 FAM86C1Q9NVL1 165 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 INTUQ9ULD6 942 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 PCDHB12Q9Y5F1 795 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 GPR39O43194 453 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 DNAJC8O75937 253 aaPredicted RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 CAPNS1P04632 268 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 SYPP08247 313 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 CDR1P51861 262 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 FOXD4Q12950 439 aaPredicted RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 SNW1Q13573 536 aaKnown RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 SLC14A2Q15849 920 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 SV2CQ496J9 727 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 FAM102BQ5T8I3 360 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 PKN3Q6P5Z2 889 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 WAPLQ7Z5K2 1190 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 NECAB2Q7Z6G3 386 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 TEX2Q8IWB9 1127 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 TCEAL8Q8IYN2 117 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 NME8Q8N427 588 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 SMARCC1Q92922 1105 aaPredicted RBP4.61□□□□□ -1.67
HFM1-208ENST00000488023 MAP6Q96JE9 813 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 ADAM7Q9H2U9 754 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 ZNF180Q9UJW8 692 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 FBXL21Q9UKT6 434 aa4.61□□□□□ -1.67
HFM1-208ENST00000488023 TRBV23-1A0A0A0MS06 115 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 GABRDO14764 452 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 FOSP01100 380 aaPredicted RBP4.6□□□□□ -1.67
HFM1-208ENST00000488023 PNLIPP16233 465 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 SDHBP21912 280 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 TCIRG1Q13488 830 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 AUHQ13825 339 aaKnown RBP4.6□□□□□ -1.67
HFM1-208ENST00000488023 ZNF460Q14592 562 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 SEPT7Q16181 437 aaKnown RBP4.6□□□□□ -1.67
HFM1-208ENST00000488023 GNPTABQ3T906 1256 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 CNKSR3Q6P9H4 555 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 HHIPL2Q6UWX4 724 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 ZBTB46Q86UZ6 589 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 MZB1Q8WU39 189 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 KLHL25Q9H0H3 589 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 EPN3Q9H201 632 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 LUC7LQ9NQ29 371 aaKnown RBP4.6□□□□□ -1.67
HFM1-208ENST00000488023 TRHDEQ9UKU6 1024 aa4.6□□□□□ -1.67
HFM1-208ENST00000488023 TNKSO95271 1327 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 CPEP16870 476 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 TNFRSF1AP19438 455 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 GRIA2P42262 883 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 ID4P47928 161 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 NEK4P51957 841 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 TMPRSS15P98073 1019 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 SLC7A5Q01650 507 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 BBS9Q3SYG4 887 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 TDRD10Q5VZ19 366 aaKnown RBP4.59□□□□□ -1.67
HFM1-208ENST00000488023 NXNQ6DKJ4 435 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 CEP128Q6ZU80 1094 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 FAM129CQ86XR2 697 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 PASD1Q8IV76 773 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 CCDC144CPQ8IYA2 1237 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 C7orf61Q8IZ16 206 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 MAGEB6Q8N7X4 407 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 CNTD1Q8N815 330 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 SLC16A11Q8NCK7 471 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 PNISRQ8TF01 805 aaKnown RBP4.59□□□□□ -1.67
HFM1-208ENST00000488023 CHMP4CQ96CF2 233 aa4.59□□□□□ -1.67
HFM1-208ENST00000488023 TIFAQ96CG3 184 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms