RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 HTATIP2Q9BUP3 242 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 CCDC39Q9UFE4 941 aa8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 FOXD3Q9UJU5 478 aaPredicted RBP8.08□□□□□ -1.12
TMEM39A-209ENST00000486235 IL16Q14005 1332 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 ADGRA2Q96PE1 1338 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 METTL12A8MUP2 240 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 TNFRSF21O75509 655 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 CYP2C8P10632 490 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 MFAP1P55081 439 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 UBXN2AP68543 259 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 HDLBPQ00341 1268 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 PPATQ06203 517 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 TCP10Q12799 353 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 FZD5Q13467 585 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 LRRC24Q50LG9 513 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 METTL24Q5JXM2 366 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 UBE2Q1Q7Z7E8 422 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 ANKRD23Q86SG2 305 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 FAM83AQ86UY5 434 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 TP53INP2Q8IXH6 220 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 U2AF1L4Q8WU68 220 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 TBC1D22AQ8WUA7 517 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 HOOK2Q96ED9 719 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 ZDHHC15Q96MV8 337 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 TBC1D32Q96NH3 1257 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 SUGCTQ9HAC7 445 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 NR2E3Q9Y5X4 410 aa8.07□□□□□ -1.12
TMEM39A-209ENST00000486235 MROH5Q6ZUA9 1318 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 CYP26A1O43174 497 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 ESRRAP11474 423 aaPredicted RBP8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 FCGRTP55899 365 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 CAVIN4Q5BKX8 364 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 EXOSC6Q5RKV6 272 aaKnown RBP8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 C2CD4AQ8NCU7 369 aaPredicted RBP8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 KAZALD1Q96I82 304 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 PARK7Q99497 189 aaKnown RBP8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 SRCIN1Q9C0H9 1055 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 PRO3102Q9H379 93 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 GABRQQ9UN88 632 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 CUL9Q8IWT3 2517 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 RPAP1Q9BWH6 1393 aaPredicted RBP8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 SZT2Q5T011 3432 aa8.06□□□□□ -1.12
TMEM39A-209ENST00000486235 MAST3O60307 1309 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 FAM170BA6NMN3 283 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 ADCY3O60266 1144 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 ALDH1L1O75891 902 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 NBPF7P0C2Y1 421 aaPredicted RBP8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 EDN3P14138 238 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 MOGSQ13724 837 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 FKBP1CQ5VVH2 108 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 NFXL1Q6ZNB6 911 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 KLHDC4Q8TBB5 520 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 FAM151AQ8WW52 585 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 BICC1Q9H694 974 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 STAP2Q9UGK3 403 aa8.05□□□□□ -1.12
TMEM39A-209ENST00000486235 SGPL1O95470 568 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 TFRCP02786 760 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 POLR3DP05423 398 aaPredicted RBP8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 FLT3LGP49771 235 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 SOX4Q06945 474 aaPredicted RBP8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 CDC42EP5Q6NZY7 148 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 HHIPL2Q6UWX4 724 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 VGLL2Q8N8G2 317 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 DEFB118Q96PH6 123 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 MRIQ9BWK5 157 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 PRKAG2Q9UGJ0 569 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 ZNF112Q9UJU3 913 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 DAGLAQ9Y4D2 1042 aa8.04□□□□□ -1.12
TMEM39A-209ENST00000486235 CXCL11O14625 94 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 TNPO2O14787 897 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 PDE8BO95263 885 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 IFIT1P09914 478 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 NOL9Q5SY16 702 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 PEAR1Q5VY43 1037 aaPredicted RBP8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 GADL1Q6ZQY3 521 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 ZFPM1Q8IX07 1006 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 ANKRD44Q8N8A2 993 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 SNX29Q8TEQ0 813 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 BHLHE41Q9C0J9 482 aaPredicted RBP8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 SOX17Q9H6I2 414 aaPredicted RBP8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 LRRC4CQ9HCJ2 640 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 SUGT1Q9Y2Z0 365 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 ZHX2Q9Y6X8 837 aa8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 RANBP2P49792 3224 aaKnown RBP8.03□□□□□ -1.12
TMEM39A-209ENST00000486235 A0A1W2PPC1 479 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 NFICP08651 508 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 SLC5A1P13866 664 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 RAB6AP20340 208 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 FGFR2P21802 821 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 PRDX5P30044 214 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 RBM25P49756 843 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 COL19A1Q14993 1142 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 PUM3Q15397 648 aaKnown RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 RABL6Q3YEC7 729 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 OGFOD2Q6N063 350 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 ZAR1Q86SH2 424 aa8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 CCDC84Q86UT8 332 aaPredicted RBP8.02□□□□□ -1.13
TMEM39A-209ENST00000486235 VSIG10LQ86VR7 867 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms