RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TLR3O15455 904 aaKnown RBP10.43□□□□□ -0.74
VCP-206ENST00000480327 MYOGP15173 224 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 IFNAR1P17181 557 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 CCL23P55773 120 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
VCP-206ENST00000480327 SSRP1Q08945 709 aaKnown RBP10.43□□□□□ -0.74
VCP-206ENST00000480327 ST3GAL1Q11201 340 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 TJAP1Q5JTD0 557 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 CPLX2Q6PUV4 134 aaKnown RBP10.43□□□□□ -0.74
VCP-206ENST00000480327 OTOP2Q7RTS6 562 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 HEATR3Q7Z4Q2 680 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 PPP1R13LQ8WUF5 828 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 CLEC4DQ8WXI8 215 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 PPM1EQ8WY54 764 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 TBC1D5Q92609 795 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 GTF3C6Q969F1 213 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 SCLYQ96I15 445 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 ZSCAN31Q96LW9 406 aaPredicted RBP10.43□□□□□ -0.74
VCP-206ENST00000480327 HIPK3Q9H422 1215 aa10.43□□□□□ -0.74
VCP-206ENST00000480327 ABCB11O95342 1321 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 RBM47A0AV96 593 aaKnown RBP10.42□□□□□ -0.74
VCP-206ENST00000480327 PTPDC1A2A3K4 754 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 PRPF3O43395 683 aaKnown RBP10.42□□□□□ -0.74
VCP-206ENST00000480327 CABYRO75952 493 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 CTDNEP1O95476 244 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 FGBP02675 491 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 RABGGTBP53611 331 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 BAATQ14032 418 aaPredicted RBP10.42□□□□□ -0.74
VCP-206ENST00000480327 WWC2Q6AWC2 1192 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 IQSEC1Q6DN90 963 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 SLC30A10Q6XR72 485 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 VTA1Q9NP79 307 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 TRMT13Q9NUP7 481 aaKnown RBP10.42□□□□□ -0.74
VCP-206ENST00000480327 MRPL11Q9Y3B7 192 aaKnown RBP10.42□□□□□ -0.74
VCP-206ENST00000480327 Q9Y3F1 56 aa10.42□□□□□ -0.74
VCP-206ENST00000480327 JAK2O60674 1132 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 CDKL5O76039 1030 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 ARHGEF15O94989 841 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 CFBP00751 764 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 CYP2C9P11712 490 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 SCG2P13521 617 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 CALML3P27482 149 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 ALDH5A1P51649 535 aaPredicted RBP10.41□□□□□ -0.74
VCP-206ENST00000480327 FOSBP53539 338 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 NAPAP54920 295 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 PURAQ00577 322 aaKnown RBP10.41□□□□□ -0.74
VCP-206ENST00000480327 TTLL4Q14679 1199 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 CCDC85BQ15834 202 aaPredicted RBP10.41□□□□□ -0.74
VCP-206ENST00000480327 PKN1Q16512 942 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 DUSP28Q4G0W2 176 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 RNF207Q6ZRF8 634 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 TRIM22Q8IYM9 498 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 SYMPKQ92797 1274 aaKnown RBP10.41□□□□□ -0.74
VCP-206ENST00000480327 TMX3Q96JJ7 454 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 AIFM3Q96NN9 605 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 RNF26Q9BY78 433 aaPredicted RBP10.41□□□□□ -0.74
VCP-206ENST00000480327 AP5M1Q9H0R1 490 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 SH2B1Q9NRF2 756 aaPredicted RBP10.41□□□□□ -0.74
VCP-206ENST00000480327 RAPGEFL1Q9UHV5 662 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 PNMA2Q9UL42 364 aa10.41□□□□□ -0.74
VCP-206ENST00000480327 STXBP3O00186 592 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 TNFRSF10AO00220 468 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 OPLAHO14841 1288 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 HOXA13P31271 388 aaPredicted RBP10.4□□□□□ -0.74
VCP-206ENST00000480327 MCM2P49736 904 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 RAB30Q15771 203 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 PFKFB3Q16875 520 aaPredicted RBP10.4□□□□□ -0.74
VCP-206ENST00000480327 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 NSUN7Q8NE18 718 aaKnown RBP10.4□□□□□ -0.74
VCP-206ENST00000480327 COPS5Q92905 334 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 ASB2Q96Q27 587 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 GAS2L1Q99501 681 aaPredicted RBP10.4□□□□□ -0.74
VCP-206ENST00000480327 VPS54Q9P1Q0 977 aa10.4□□□□□ -0.74
VCP-206ENST00000480327 ORC3Q9UBD5 711 aaPredicted RBP10.4□□□□□ -0.74
VCP-206ENST00000480327 BRWD1Q9NSI6 2320 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 DOCK5Q9H7D0 1870 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 RFXAPO00287 272 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 ARIH2O95376 493 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 DEXIO95424 95 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 FDPSP14324 419 aaKnown RBP10.39□□□□□ -0.75
VCP-206ENST00000480327 EDNRBP24530 442 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 RPS6P62753 249 aaKnown RBP10.39□□□□□ -0.75
VCP-206ENST00000480327 TRAF1Q13077 416 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 USP17L6PQ6QN14 398 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 SPRED2Q7Z698 418 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 FCHSD1Q86WN1 690 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 MCF2L2Q86YR7 1114 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 ATXN2LQ8WWM7 1075 aaKnown RBP10.39□□□□□ -0.75
VCP-206ENST00000480327 CTAGE1Q96RT6 745 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 WDR11Q9BZH6 1224 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 SLC28A3Q9HAS3 691 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 GJB4Q9NTQ9 266 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 BARHL2Q9NY43 387 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 THEGQ9P2T0 379 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 MSRAQ9UJ68 235 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 SIP14410 1827 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 ATG2AQ2TAZ0 1938 aa10.39□□□□□ -0.75
VCP-206ENST00000480327 SMCO2A6NFE2 343 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms