RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, human

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD6-208	ENST00000480022	RASSF7	Q02833	373 aa		11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	GRIN1	Q05586	938 aa		11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	SETDB1	Q15047	1291 aa		11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	TTF1	Q15361	905 aa	Predicted RBP	11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	FAM84B	Q96KN1	310 aa	Predicted RBP	11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	PURB	Q96QR8	312 aa	Known RBP	11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	DNAJC7	Q99615	494 aa		11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	FBXO2	Q9UK22	296 aa	Predicted RBP	11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	LUC7L2	Q9Y383	392 aa	Known RBP	11.97	□□□□□ -0.49
CHD6-208	ENST00000480022	TTC26	A0AVF1	554 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	RCCD1	A6NED2	376 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022		A6NHS1	94 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	CLTA	P09496	248 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	PRLR	P16471	622 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	AOC3	Q16853	763 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	MAATS1	Q7Z4T9	603 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	FBXO33	Q7Z6M2	555 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	TMBIM4	Q9HC24	238 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	NFU1	Q9UMS0	254 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	LTBP3	Q9NS15	1303 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	MACROD2	A1Z1Q3	448 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	PPP1R3G	B7ZBB8	358 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	LUC7L3	O95232	432 aa	Known RBP	11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	FAM153B	P0C7A2	387 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	ROR2	Q01974	943 aa	Known RBP	11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	TRIM29	Q14134	588 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	FAM153C	Q494X1	144 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	CAVIN4	Q5BKX8	364 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	ANKRD23	Q86SG2	305 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	PNMA8A	Q86V59	439 aa	Predicted RBP	11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	NOC3L	Q8WTT2	800 aa	Known RBP	11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	TSC22D3	Q99576	134 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	SLC5A4	Q9NY91	659 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	FAM153A	Q9UHL3	310 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	SLC12A6	Q9UHW9	1150 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	CTNND2	Q9UQB3	1225 aa		11.96	□□□□□ -0.49
CHD6-208	ENST00000480022	SH2B2	O14492	632 aa	Predicted RBP	11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	DIAPH2	O60879	1101 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	COQ9	O75208	318 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	CDKL5	O76039	1030 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	PAFAH1B1	P43034	410 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	PHKA1	P46020	1223 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	CARS	P49589	748 aa	Known RBP	11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	UBXN1	Q04323	297 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	LAMB3	Q13751	1172 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	CDC37	Q16543	378 aa	Predicted RBP	11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	ZNF579	Q8NAF0	562 aa	Known RBP	11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	AGAP11	Q8TF27	550 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	ALS2CR12	Q96Q35	445 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	NDST4	Q9H3R1	872 aa		11.96	□□□□□ -0.5
CHD6-208	ENST00000480022	GSTA1	P08263	222 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	TCP1	P17987	556 aa	Known RBP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	HIBADH	P31937	336 aa	Known RBP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	PRELP	P51888	382 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	KIF5A	Q12840	1032 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	ARMC3	Q5W041	872 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	WDR59	Q6PJI9	974 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	CPLX4	Q7Z7G2	160 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	TRIM74	Q86UV6	250 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	TRIM73	Q86UV7	250 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	EZH1	Q92800	747 aa	Predicted RBP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	GDF3	Q9NR23	364 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	ZFAT	Q9P243	1243 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	ARFGEF1	Q9Y6D6	1849 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	CFAP73	A6NFT4	308 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	CCT8L1P	A6NM43	557 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	TACC1	O75410	805 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	PYGL	P06737	847 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	GCLC	P48506	637 aa	Predicted RBP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	IMMT	Q16891	758 aa	Known RBP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	DOK7	Q18PE1	504 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	ZMYM1	Q5SVZ6	1142 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	IFT81	Q8WYA0	676 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	TSGA10	Q9BZW7	698 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	VPS33B	Q9H267	617 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	CHCHD3	Q9NX63	227 aa	Known RBP	11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	PLAA	Q9Y263	795 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	DUSP10	Q9Y6W6	482 aa		11.95	□□□□□ -0.5
CHD6-208	ENST00000480022	KCNJ18	B7U540	433 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	KIF4A	O95239	1232 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	MYZAP	P0CAP1	466 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	GNAT1	P11488	350 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	ATP4A	P20648	1035 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	IARS	P41252	1262 aa	Known RBP	11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	AFM	P43652	599 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	GUCY2F	P51841	1108 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	KCNJ12	Q14500	433 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	TCP11X2	Q5H9J9	407 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	ZNF804A	Q7Z570	1209 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	WHAMM	Q8TF30	809 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	GSDMA	Q96QA5	445 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	SENP2	Q9HC62	589 aa		11.94	□□□□□ -0.5
CHD6-208	ENST00000480022	RGL1	Q9NZL6	768 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms