RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 DNAJC7Q99615 494 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 TTYH3Q9C0H2 523 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 ZNRF3Q9ULT6 936 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 CAPN11Q9UMQ6 739 aa14.49□□□□□ -0.09
SEC13-216ENST00000479868 LUC7L2Q9Y383 392 aaKnown RBP14.49□□□□□ -0.09
SEC13-216ENST00000479868 NPHP3-ACAD11A0A0J9YXS1 232 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 POTEFA5A3E0 1075 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 ABL1P00519 1130 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 PLA2G4BP0C869 781 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 POTEIP0CG38 1075 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 PSMD2Q13200 908 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 ERCC6LQ2NKX8 1250 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 MCTP2Q6DN12 878 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 POTEGQ6S5H5 508 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 POTEEQ6S8J3 1075 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 OR8K1Q8NGG5 319 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 CYP2W1Q8TAV3 490 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 FGFBP2Q9BYJ0 223 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 PANK4Q9NVE7 773 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
SEC13-216ENST00000479868 ZYXQ15942 572 aaKnown RBP14.48□□□□□ -0.09
SEC13-216ENST00000479868 WDR59Q6PJI9 974 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 NIM1KQ8IY84 436 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 CCDC94Q9BW85 323 aaPredicted RBP14.48□□□□□ -0.09
SEC13-216ENST00000479868 GOPCQ9HD26 462 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 AGPAT5Q9NUQ2 364 aa14.48□□□□□ -0.09
SEC13-216ENST00000479868 TBX3O15119 743 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 TRIM21P19474 475 aaKnown RBP14.47□□□□□ -0.09
SEC13-216ENST00000479868 RAD51AP2Q09MP3 1159 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 NCAPH2Q6IBW4 605 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 LRRC55Q6ZSA7 311 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 GPBP1Q86WP2 473 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 CATSPER3Q86XQ3 398 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 TBC1D5Q92609 795 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 SLF1Q9BQI6 1058 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 TBC1D7Q9P0N9 293 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 CGNQ9P2M7 1197 aaKnown RBP14.47□□□□□ -0.09
SEC13-216ENST00000479868 SCAF8Q9UPN6 1271 aaKnown RBP14.47□□□□□ -0.09
SEC13-216ENST00000479868 UTRNP46939 3433 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 SHTN1A0MZ66 631 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 PIK3CDO00329 1044 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 MSH4O15457 936 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 CYP11B2P19099 503 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 CIITAP33076 1130 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 BAG6P46379 1132 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 MAP3K9P80192 1104 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 LRRC63Q05C16 580 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 CXCL9Q07325 125 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 NBPF9Q3BBW0 867 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 FAM26FQ5R3K3 315 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 FKBP1CQ5VVH2 108 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 MTMR14Q8NCE2 650 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 AGBL3Q8NEM8 1001 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 CARD6Q9BX69 1037 aa14.47□□□□□ -0.09
SEC13-216ENST00000479868 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
SEC13-216ENST00000479868 BMP2KQ9NSY1 1161 aaPredicted RBP14.47□□□□□ -0.09
SEC13-216ENST00000479868 WNT10BO00744 389 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 CFBP00751 764 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 ERCC3P19447 782 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 PSMC6P62333 389 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 ARSHQ5FYA8 562 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 HAUS3Q68CZ6 603 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 CCDC84Q86UT8 332 aaPredicted RBP14.46□□□□□ -0.09
SEC13-216ENST00000479868 MYOCDQ8IZQ8 938 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 ERGIC2Q96RQ1 377 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 PGAP2Q9UHJ9 254 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 PCDHA2Q9Y5H9 948 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 MRFAP1Q9Y605 127 aa14.46□□□□□ -0.09
SEC13-216ENST00000479868 MEIS1O00470 390 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 TBC1D12O60347 775 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 NDUFA10O95299 355 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 SPATA31C1P0DKV0 1188 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 CAP2P40123 477 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 SLC12A3P55017 1021 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 SF3B2Q13435 895 aaKnown RBP14.46□□□□□ -0.1
SEC13-216ENST00000479868 GLIPR1L2Q4G1C9 344 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 ZCWPW2Q504Y3 356 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 ZBED3Q96IU2 234 aaPredicted RBP14.46□□□□□ -0.1
SEC13-216ENST00000479868 VPS33BQ9H267 617 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 VCPKMTQ9H867 229 aa14.46□□□□□ -0.1
SEC13-216ENST00000479868 REXO2Q9Y3B8 237 aaKnown RBP14.46□□□□□ -0.1
SEC13-216ENST00000479868 EPN1Q9Y6I3 576 aaPredicted RBP14.46□□□□□ -0.1
SEC13-216ENST00000479868 SLC26A4O43511 780 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 KIF5CO60282 957 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 CYP3A4P08684 503 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 ARHGAP25P42331 645 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 VWA3BQ502W6 1294 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 ARHGAP29Q52LW3 1261 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 FKBP15Q5T1M5 1219 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 FBXO38Q6PIJ6 1188 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
SEC13-216ENST00000479868 FAM83AQ86UY5 434 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 RETREG2Q8NC44 543 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 MNS1Q8NEH6 495 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 PCMTD1Q96MG8 357 aaPredicted RBP14.45□□□□□ -0.1
SEC13-216ENST00000479868 FAM20AQ96MK3 541 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 NUP58Q9BVL2 599 aa14.45□□□□□ -0.1
SEC13-216ENST00000479868 RANBP17Q9H2T7 1088 aaKnown RBP14.45□□□□□ -0.1
SEC13-216ENST00000479868 NDST4Q9H3R1 872 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms